Sphaerodactylus townsendi (Townsend's least gecko): 125444651
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Entry
125444651 CDS
T08213
Symbol
IRF3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
stow
Sphaerodactylus townsendi (Townsend's least gecko)
Pathway
stow04620
Toll-like receptor signaling pathway
stow04621
NOD-like receptor signaling pathway
stow04622
RIG-I-like receptor signaling pathway
stow04623
Cytosolic DNA-sensing pathway
stow05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stow00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125444651 (IRF3)
04621 NOD-like receptor signaling pathway
125444651 (IRF3)
04622 RIG-I-like receptor signaling pathway
125444651 (IRF3)
04623 Cytosolic DNA-sensing pathway
125444651 (IRF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125444651 (IRF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stow03000
]
125444651 (IRF3)
04131 Membrane trafficking [BR:
stow04131
]
125444651 (IRF3)
Transcription factors [BR:
stow03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
125444651 (IRF3)
Membrane trafficking [BR:
stow04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125444651 (IRF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
125444651
NCBI-ProteinID:
XP_048373139
LinkDB
All DBs
Position
LG15:18248845..18264541
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AA seq
463 aa
AA seq
DB search
MGAQRPLIVPWLLEQLDAQQFPGVSWLNEERTRFRIPWKHGSRQSIIPEDFQLFEAWAIA
SGRYNPRTDPRTASDWKRNFRAALNRKPEIQLIADNSTNSEDPHKVFEIQHLANPNDNGQ
AVAGDVQENLEVHGDSLPSGQDDSLEDVLMSLSLSSSEYGGSGARLVPGAENPAYYAGLS
ASGLDPGPPTLPMIPLEPALGASNFEPVADSAASCVGLPPSGLDQASPMVPVLPLEQLME
STALETDFEVRVYYRGRQVFHDTFSKVQGLRFVPPGSPEPYPDLADVVLPDVAILNDELQ
ASYTSRLLRGVAPGVLLRIEGPSLCGSRLGTCHVFWSQSEAPTAGARYGGFPKRNFTCLY
SLQQFVQELVGFLEGRNGSPEYTLWLCFGEDWPDPNCIWRKKLIMVQVIPKVFEILHEMS
KASGASSLNQVEPDLRISDSLQDSTFLERLKNWGEKMDVQFGS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggggctcaaaggcctctcattgtgccctggttgttggaacagctggatgcccagcaa
tttccaggcgtgtcatggctgaacgaggaacggacacggttcaggataccgtggaagcat
ggatctcggcagagcatcatcccagaggatttccagctatttgaggcttgggccattgcc
agcggccgctacaatccaaggactgatcccaggacagcttcggattggaaaagaaacttt
cgcgctgccctgaaccgaaagccagagatccagctgatagcggataacagcacaaactca
gaagaccctcacaaagtgtttgaaatacaacatcttgccaatccaaatgacaatgggcag
gcagtggctggggatgtgcaggaaaacctggaggtacacggagacagtctaccttctggc
caggatgactcactagaggatgtgctgatgtccctcagcctctccagttccgaatacggt
gggtctggtgcaagattggtgccaggagcagaaaacccagcttattatgcaggcctttct
gcatctggtttggatcctggtccaccaacactcccgatgataccactggaaccagccttg
ggtgccagtaattttgagccagtggcagacagtgcggcttcctgtgtaggcctgcctcca
tctggtttggatcaggcctcacctatggtcccagtgctgcccttggaacagctcatggaa
tccacagcgctagaaacagattttgaagtgcgggtctactatcgaggtcggcaggtcttc
cacgacaccttcagcaaggtacagggcttgcgctttgtgccccctggatctcctgaacct
tatccagatttggccgacgtggtgttgcctgatgtcgcgatcttgaatgatgaactgcaa
gcaagctacacaagtcgtcttctgcgaggtgtggcccctggggttctgctccgtatcgag
ggtccatcgctgtgcggcagtcgactgggtacctgccatgtcttctggagccaatctgaa
gcacccacagccggggcacgttatggaggattcccgaagagaaacttcacttgcctttac
agcctgcagcagtttgtgcaagaactggttggcttcctggagggacgtaatggctcccct
gaatataccctgtggttgtgtttcggagaagactggcctgaccccaactgcatttggagg
aaaaaactgatcatggtacaggtcatccccaaggttttcgaaatactccacgaaatgagc
aaagccagtggggcatcctcgttaaatcaagtcgaaccagacctgaggatatccgactcg
ctgcaggactccaccttcttggagcgactgaaaaactggggggagaagatggatgtgcag
tttggcagctag
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