Scyliorhinus torazame (cloudy catshark): 140394315
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Entry
140394315 CDS
T11303
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03008
Ribosome biogenesis in eukaryotes
stoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140394315
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140394315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stoz03041
]
140394315
03009 Ribosome biogenesis [BR:
stoz03009
]
140394315
Spliceosome [BR:
stoz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
140394315
Ribosome biogenesis [BR:
stoz03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
140394315
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Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
140394315
NCBI-ProteinID:
XP_072337571
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Position
17:complement(159636387..159638678)
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AA seq
128 aa
AA seq
DB search
MSEQDVNPKAYPLADAQLTKTILDLVQQAGNYKQLRKGANEATKTLNRGVAELIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVCRPVIACSVTIKEGSQLKPQIQSVQ
QAVERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagacgttaacccaaaagcctatcctcttgcggatgcccagctaacaaag
acaattctggatcttgtgcagcaagcggggaactataagcaactgcgaaagggagctaat
gaagccaccaagaccttgaacaggggagttgctgagttgatagtgatggctgcagatgct
gaaccattggagattattcttcatttgcctcttctctgtgaagataaaaatgtcccttac
gtttttgtaaggtctaagcaggctctggggcgtgcgtgtggggtgtgtcggccagttatt
gcatgctctgttacaataaaggaaggctctcagctgaagccacagattcagtctgttcaa
caggcagtcgagcgtttactggtttga
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