Scyliorhinus torazame (cloudy catshark): 140421192
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Entry
140421192 CDS
T11303
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stoz01009
]
140421192
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stoz04040
]
140421192
Protein phosphatases and associated proteins [BR:
stoz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140421192
Ion channels [BR:
stoz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140421192
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
140421192
NCBI-ProteinID:
XP_072361800
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Position
5:288348735..288502536
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AA seq
992 aa
AA seq
DB search
MAQLYYKKVNYSPYIDRIPLQIVRAENELSLEEKAYLNAVEKGDYASVKQALEEAEIYFN
ININCTDPLGRSALLIAIENENLEIMELLLSFSIYVGDALLYAIRKEVVGAVELLLHYRK
PSGEKQVPPLLMDAQFSEFTPDITPIMLAAHTNNYEIIKLLVHGGVSIPRPHQVRCNCVE
CVSSSEVDSLRHSRSRLNIYRALASPSLIALSSEDPILTAFQLGWELKELSKVENEFKAE
YEELSQQCKHFAKDLLDQARSSRELEIILNHRDDQSDELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRRHWAVKLLTCITIGFLFPILSVVYLVAPKSRLGLFI
RNPFIKFICHTGSYLTFLFLLLLASQHIVKTDLHMQGPPPTVVEWMILPWVLGFIWAEIK
EMWDGGFTEYVHDWWNLMDFAMNSLYLATITLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIIPSPKSVWYLCKWLHSHICPSRDSENEQKRENLREFTERHADDLVQNQHYQEVIKNL
VKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLGLLGNRKASRRTYSTSSDGMQI
GDLEEDSAEEMKKIVSFNLAGESNDRKKLKMNSFSVSALIKSVSGIDLNEEKSKNNMLSK
QPSSVRNGNRFQRCPNSKKDSFKRLGLLFSKMNGQLSEPSPEPVSSISDGLHQAHNMWQD
FTYSQISNPNNITKSESSLNAVGLNEVNSRNRIDSHCSANHNDSFNCSSNISASNNKLID
SSSDVYDSWGEACDLLMTRWNSRQEDYVTTQL
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaaaaaggtcaactattctccatacatagaccggattccattg
cagatagtgcgagcagaaaatgagctctcgctggaggaaaaagcttatctgaatgcagtg
gaaaaaggggactacgccagcgtgaagcaggctctggaggaagctgaaatctactttaat
attaatatcaactgcacagatcctctgggacgcagcgcactcctcatagcaattgaaaat
gaaaacttggagatcatggagctgctcctaagtttcagtatctacgtgggtgatgcgttg
ctctatgctatacgaaaggaggttgttggcgctgtcgagcttctgctgcattataggaag
ccaagtggagaaaagcaggtccctcctttactgatggatgcccagttttcagaattcact
ccagatattacacccataatgcttgctgcgcacaccaataactatgaaattataaaactg
ttggtacacggaggagtctccatccctcgaccccaccaagtcaggtgcaactgcgtggag
tgtgtctccagttcagaggttgacagcctccgtcactcgaggtcacggctgaatatctac
cgtgcccttgccagcccttcgttaatagccttgtcaagcgaagacccgatcctcacagcc
tttcaactgggttgggaactgaaggagcttagcaaagtggagaatgagttcaaagctgaa
tacgaagagctgtcacagcaatgcaagcactttgccaaagacctgctggatcaggctcga
agttccagggaactggagatcatactgaaccaccgagatgatcagagtgatgagttagat
ccccaaaaatgccatgatcttgccaaactaaaggtagccatcaagtaccatcagaaagag
tttgttgctcagccaaactgccagcaattactggctacattatggtatgatggattccca
ggctggcgccgtcgacattgggcagtcaagctcctaacctgcattaccatcgggttccta
tttccaatactctctgtggtttatttggtggctcctaagagcaggctgggactgttcatt
aggaacccttttattaagtttatctgccacaccggctcctacctgacatttcttttcctg
ctgttgttagcttctcagcacattgtcaagactgaccttcacatgcaggggccaccacca
actgttgtcgagtggatgatattaccatgggttttaggttttatatgggctgaaatcaaa
gaaatgtgggatggtgggttcactgaatatgtacatgactggtggaacctgatggacttt
gcaatgaattccttgtatttagccaccatcacactgaagattgttgcctatgtgaagtac
aatggctcacgcccccgtgaggagtgggagatgtggcacccaacgctgattgcagaagcc
ctgtttgcaatagccaatatcttcagttcccttcgtttgatctcgcttttcactgcgaac
tctcacctgggaccactacagatttcgctgggccgcatgctccttgatattctcaagttc
ctcttcatttattgcctggtgctgctcgcatttgcaaatggactgaatcagctgtacttt
tactatgagaccagcgcttctgaagagcccaataattgcaagggaatacggtgtgagaag
caaaacaatgcattctcaacattatttgagacgttacaatccctattctggtcagttttt
ggtctgttgaatttgtacgtcacaaatgtgaaagctcggcacgagttcacggagtttgtt
ggagccaccatgtttggaacttacaatgtaatctccttggttgtcttgctcaacatgctg
attgccatgatgaataactcttaccagctcattgcagaccatgctgacatcgaatggaaa
tttgccaggacgaagctttggatgagttattttgatgaaggtgcaactcttccacctcct
ttcaacatcatccccagcccaaagtctgtctggtacctctgcaaatggctgcactctcac
atctgtccaagcagagactcggagaatgaacaaaagcgcgagaatctcagagaatttaca
gaacgtcatgcggatgacttggttcaaaaccaacactaccaggaggttattaaaaattta
gtgaaaagatacgttgcagctatgatcagaagtgctaaaactgatgaaggacttacagaa
gagaactttaaggaactgaaacaggatatctccagtttccgctatgaggttcttggcctt
ttgggaaacagaaaagcatctcgaagaacatattctaccagcagcgatgggatgcaaata
ggagacttggaagaagatagtgcagaagaaatgaaaaaaattgtgtcgttcaatttggca
ggtgaaagcaatgaccgaaagaagctgaaaatgaactctttcagtgtttcagctctaatc
aaatcagtttctggaattgacctgaatgaagaaaaatctaaaaataatatgctgagtaag
caaccttcatcagtcagaaacggcaatcgattccagagatgcccaaactccaagaaggat
tctttcaaaagacttggcctcttgttcagcaagatgaatgggcaactctctgaaccaagt
cccgagcctgtctcgagcatttctgatggactacatcaagcgcacaatatgtggcaggac
ttcacgtattcccaaatttcgaatcctaacaatataaccaagagtgagagcagtctcaat
gctgttggtcttaatgaagtgaacagtagaaacagaattgatagccattgttcagctaac
cataatgactccttcaattgctcttccaatatcagtgcctccaataacaaactcattgac
tcatcaagtgatgtctatgactcctggggggaagcctgtgacttgctgatgaccaggtgg
aacagtcgtcaagaggactatgtaacaactcaattataa
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