Salinispora tropica: Strop_3217
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Entry
Strop_3217 CDS
T00504
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
stp
Salinispora tropica
Pathway
stp00300
Lysine biosynthesis
stp00550
Peptidoglycan biosynthesis
stp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Strop_3217
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Strop_3217
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stp01011
]
Strop_3217
Enzymes [BR:
stp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Strop_3217
Peptidoglycan biosynthesis and degradation proteins [BR:
stp01011
]
Precursor biosynthesis
Amino acid ligase
Strop_3217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABP55651
UniProt:
A4X9S0
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All DBs
Position
complement(3685496..3687040)
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AA seq
514 aa
AA seq
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MSGNPRPRSVTGIRLGNLAARLAAESGADAVDLRPGPTEPTVTGVTHASQEVRPGDLYAA
LPGARRHGAEFVSAAARAGAVAVLTDPDGAAATAEVDLPMLVVPDPRAVLGDLASVVYGD
PTAGLTVIGVTGTAGKTSTAYLVESGLRAAGHTTGLIGTVETRLGDLVVDSVRTTPEATD
LHAMLAAARERGVTAVVMEVSSHALAMGRVGGVRFTVGGYTNFGSDHLDFHADSVDYFAA
KAKLFDGRCEVEVLNHDDPALLPLHRPATVTYSAAGDGAATWWADEAGGEGYAQRFTLHG
PDGLTLPAGVALPGRHNVANALLAVAVLVAAGVAPRTAVAGVADCGGVPGRLELVPSPGP
VRGVVDYAHKTDAIVAALAALREFSTGRLICLLGAGGDRDRGKRPLMGVAAAEGADVVLV
TDDNPRTEDPADIRAEVLAGVRRADTEAQVLEVPGRRAAIAEAVQLAAPGDVVALLGKGH
EQGQEVGGQVHPFDDRTELAAALRARFGDRPGQS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggcaatcctcgccctcgtagcgtgaccggaatccggctcggtaacctcgccgct
cggctcgccgccgagtccggtgcggacgccgttgaccttcggcccggtccaacggaaccg
acagtcaccggggtgacgcacgccagccaggaggtccgccccggtgacctgtacgcggcc
ctgcccggtgcccggcggcacggcgccgagttcgtctcggccgcggcccgagccggtgcg
gtggccgtgctgaccgatccggatggcgcggcggcgaccgcggaagtcgatcttcccatg
ctggtggtgccggacccgcgggcggtactgggtgacctcgccagtgtggtgtacggcgat
ccgaccgccgggttgacggtgatcggggtgaccggaaccgcgggcaagacctccacggcg
tacctggtcgagtcggggctgcgagcggccgggcacaccaccggtctgatcggcaccgtg
gagacccggctcggtgatctggtggtcgacagcgtccggaccacccccgaggcgaccgac
ctgcacgccatgctcgccgctgcccgagagcgcggcgtcaccgccgtggtcatggaggtg
tccagccacgcgctggccatggggcgggtcggtggcgtccggttcaccgtcggcggctat
accaacttcggctccgaccacctcgacttccacgccgactccgtggactacttcgccgcc
aaggcgaagctcttcgacggccgctgcgaggtggaggtgctcaaccacgacgacccggcg
ctgcttccgttgcatcgacccgccaccgtcacctactccgcggccggcgacggcgccgcc
acctggtgggccgacgaggccggtggcgaggggtacgcgcagcgcttcaccctgcacggc
ccggacgggctgaccctgcccgccggggtggccctacccggtcggcacaacgtcgccaac
gcgctgctcgccgtcgccgtactggtggcggccggggtggcgccgcggaccgccgtcgcg
ggggtggccgactgcggcggcgttcccggtcggctggagctggtgccgtcccccggcccg
gtgcgcggcgtcgtcgactacgcgcacaagaccgatgcgatcgttgccgcgctggccgcc
ctgcgggagttcagcaccgggcggctcatctgcctactcggcgccggcggcgaccgggac
cggggcaagcggcccctgatgggtgtcgccgccgcggagggcgcggacgtggtgctggtg
accgacgacaacccgcggaccgaggatcccgccgacatccgtgccgaggtgctcgccggc
gtgcgtcgggccgacaccgaggcgcaggtcctggaggtacccggtcggcgtgcggccatc
gcggaggcggtccagctcgctgcgcccggggacgtggtggcgctgttgggcaaggggcac
gagcaggggcaggaggttggcgggcaggtgcatcccttcgacgatcgcaccgagctggcc
gccgcgctgcgggcccgcttcggcgaccggccggggcagtcgtga
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