Streptomyces sp. PBH53: QR97_09005 Help Entry QR97_09005        CDS       T10303                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism stpb  Streptomyces sp. PBH53 Pathway stpb03030   DNA replication stpb03410   Base excision repair stpb03420   Nucleotide excision repair stpb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:stpb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     QR97_09005    03410 Base excision repair     QR97_09005    03420 Nucleotide excision repair     QR97_09005    03430 Mismatch repair     QR97_09005  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:stpb03032]     QR97_09005    03400 DNA repair and recombination proteins [BR:stpb03400]     QR97_09005 Enzymes [BR:stpb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      QR97_09005 DNA replication proteins [BR:stpb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      QR97_09005 DNA repair and recombination proteins [BR:stpb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      QR97_09005    NER (nucleotide excision repair)     GGR (global genome repair) factors      QR97_09005    MMR (mismatch excision repair)     DNA ligase      QR97_09005   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       QR97_09005 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH MutL PX RNA_lig_T4_1 Zn_ribbon_TFIIB Motif Other DBs NCBI-ProteinID:  AKN69953 LinkDB All DBs Position 2033040..2035235 Genome browser AA seq 731 aa AA seqDB search MAGDKQAETTAVPAEARDKHAQLAEQVEEHRFRYYVKDAPVISDAEFDELLKSLEALEEQ YPELRTPDSPTQKVAGSYETEFTAVEHRQRMLSLDNTFNDDELAAWADRIARELGDQEYH FLCELKVDGLAVNLTYERGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLGGDKVPDLVE IRGEVYFPMEKFLELNERLVAAGDKPFANPRNAAAGSLRQKDPRVTATRPLHMVVHGIGA LEGYTGLTRLSEAYDLLKTWGLPTSRHNRVVDDLDGVREFIAHYGENRHSVEHEIDGVVV KLDQIRLQGRLGSTARAPRWAIAYKYAPEEVNTKLVDIKVGVGRTGRVTPYAQVEPVTVA GSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPSECP ECGTALRPMKEGDIDLRCPNARTCPAQLRERVSYLAGRECLDIEHFGAVAAAALTRPLEP ADPPLVDEGDLFDLTVEKLLPIKAYVLDPDSGLPKRDPKTGEEKVVTVFANQKGEPKKNT LALLANIEAAKSRPLARFLNGLSIRHVGPVAAQALAREFRSIDRIEQATEEELAATDGVG PIIAAALKEWFAEDWHREIVRKWKAAGVPLEDQSSGEEEGPRPLEGLTVVVTGTLEHFTR DGAKEALQGQGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKVPVLNEDGFNVLLEQGPE AAAEVALPTGE NT seq 2196 nt NT seq  +upstreamnt  +downstreamnt gtggccggcgacaagcaagcggagacgacggcggtgcccgccgaggcccgcgacaagcac gcgcagctggcggagcaggtcgaggagcaccgcttccggtactacgtgaaggacgctccc gtcatcagcgacgcggagttcgacgagctcctgaagtcgctggaggccctggaggagcag tacccggagctgcgcaccccggactcgcccacccagaaggtcgcggggtcgtacgagacg gagttcaccgcggtcgagcaccgccagcggatgctctccctcgacaacacgttcaacgac gacgagctggccgcctgggccgaccgcatcgccagggaactcggcgaccaggagtaccac ttcctgtgcgagctgaaggtggacggcctcgcagtcaacctcacctacgagaggggccgc ctcacccgcgcggccacccgcggcgacggccgcaccggcgaggacatcacgcccaacgtg cggaccatcgcggagatcccggaccgcctgggcggcgacaaggtgcccgacctggtggag atccgcggcgaggtctacttcccgatggagaagttcctcgaactgaacgaacgcctggtc gcggccggcgacaagcccttcgccaacccccgcaacgccgccgccggttcgctgcgccag aaggacccgcgggtcaccgccacccgcccgctgcacatggtcgtccacggcatcggcgcc ctggagggctacacgggcctgacccggctctccgaggcctacgacctgctcaagacctgg ggcctgcccacgtcccggcacaaccgcgtggtggacgacctggacggcgtacgggagttc atcgcgcactacggcgagaaccgccactccgtcgagcacgagatcgacggtgtcgtggtc aagctggaccagatccgcctccaggggcggctcggctccaccgcgcgggccccgcgctgg gcgatcgcctacaagtacgcgccggaggaggtcaacaccaagctggtcgacatcaaggtg ggcgtcggccgcaccggccgggtcacgccgtacgcccaggtcgagccggtcacggtcgcg ggcagcgaggtggagttcgccaccctgcacaaccaggaggtcgtcaaggccaagggcgtg ctcatcggcgacaccgtggtgctgcgcaaggccggtgacgtcatcccggagatcctcggc ccggtggtcgacctgcgggacggcagcgagcgggagttcgtgatgccgagcgagtgcccc gagtgcgggacggcgctgcggcccatgaaggagggcgacatcgacctccgctgtcccaac gcccgtacctgcccggcccagttgcgcgagcgggtctcctatctcgccggccgggagtgc ctggacatcgagcacttcggcgcggtggccgccgccgcgctgacccgtccgctggagccg gccgacccgccgctggtggacgagggcgacctgttcgacctgacggtggagaagctgctg cccatcaaggcctatgtcctcgacccggacagcggcctgcccaagcgcgacccgaagacc ggcgaggagaaggtcgtcacggtcttcgccaaccagaagggcgagccgaagaagaacacc ctcgccctgctggcgaacatcgaggcggccaagtcccgcccgctcgcccgcttcctgaac gggctgtcgatccggcacgtgggtccggtcgccgcgcaggccctcgcgcgggagttccgg tccatcgaccgcatcgagcaggcgaccgaggaggagctggcggccaccgacggcgtcggc ccgatcatcgccgccgcgctcaaggagtggttcgccgaggactggcaccgcgagatcgtg cgcaagtggaaggccgcgggggtccccctggaggaccagtcctccggtgaggaggagggg ccgcgtccgctggagggactcaccgtcgtcgtcaccggcacactggagcacttcacccgg gacggcgccaaggaggcacttcagggccagggcgccaaggtgaccggttcggtttccaag aagacctcatttgtcgtagtgggggacaacccggggtcgaagtacgacaaggccatgcaa ttgaaggttccggttctgaacgaggacggtttcaacgtcctcttggaacaggggcccgaa gcggcggccgaagtcgcgcttccgaccggggagtag

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