KEGG   Streptomyces sp. 769: GZL_03250
Entry
GZL_03250         CDS       T03587                                 
Name
(GenBank) DNA ligase C NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
stre  Streptomyces sp. 769
Pathway
stre03030  DNA replication
stre03410  Base excision repair
stre03420  Nucleotide excision repair
stre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:stre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GZL_03250
   03410 Base excision repair
    GZL_03250
   03420 Nucleotide excision repair
    GZL_03250
   03430 Mismatch repair
    GZL_03250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stre03032]
    GZL_03250
   03400 DNA repair and recombination proteins [BR:stre03400]
    GZL_03250
Enzymes [BR:stre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     GZL_03250
DNA replication proteins [BR:stre03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GZL_03250
DNA repair and recombination proteins [BR:stre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     GZL_03250
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GZL_03250
   MMR (mismatch excision repair)
    DNA ligase
     GZL_03250
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      GZL_03250
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia HHH
Other DBs
NCBI-ProteinID: AJC55836
UniProt: A0A0A8EP78
LinkDB
Position
complement(3481026..3483242)
AA seq 738 aa
MAGEQHAAASEVPAAAREKHAQLAEQIEEHRFRYYVKDAPVVSDAEFDRLLRALEALEET
HPELRTPDSPTQKVAGSYATEFTEVAHRERMLSLDNAFDDEELSAWAERIATELGGDAKG
AGYHFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLQGDRVP
ELVEIRGEVYFPMEKFLELNERLVADGKPPFANPRNAAAGSLRQKDPKVTATRPLHMVVH
GLGARDGLEIDRLSEAYDLLKEWGLPTATHNRVVDSLAAVREFIAHYGDPETRRTAVEHE
IDGVVVKLDEIRLQGRLGATSRAPRWAIAWKYPPEEVNTKLVDIRVGVGRTGRVTPYAVV
EPVTVAGSEVEFATLHNQDVVKAKGVLIGDTIVIRKAGDVIPEILGPVVDLRDGTEREFV
MPAECPECGSALQPAKEGDIDLRCPNARSCPAQIRERLFYLAGRKCLDIENFGYVAATAL
SQPLEPAEPPLTDEGGLFDLSVEELLPIKSHVLDPDTGLPKRDPKTGEEKVVTFFANQKG
EPKKNTLAMLENIQAAKERPLARILTGLSIRHVGPVAAQALAREFRSIDRIREASEEELA
AVEGVGGTIAASLKQWFAVDWHQEIIERWRAAGVRMEEEQSGETGPRPLEGVTVVVTGTL
QSHTRDGAKEALQALGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQLKVPVLDDDGFAVLL
EQGPEAARAVAVTPPEEE
NT seq 2217 nt   +upstreamnt  +downstreamnt
gtggctggcgaacagcacgcggcggcatccgaggtgcccgccgcggcacgggagaagcac
gcgcagctcgctgagcagatcgaggagcaccgcttccggtactacgtgaaggacgccccg
gtcgtcagcgacgcggagttcgacaggctgctgcgcgccctggaggccctggaggagacc
catcccgagctgcgcaccccggactccccgacccagaaggtcgccgggtcgtacgccacg
gagttcaccgaggtcgcgcaccgcgagcggatgctctcgttggacaacgccttcgacgac
gaggagctgtcggcctgggccgagcggatcgccaccgaactcggcggcgacgccaagggc
gccggctaccacttcctgtgcgagctgaaggtcgacggcctcgcggtcaacctcacctac
gagcacggccgcctcacccgcgccgccacccgcggcgacggccgcaccggcgaggacatc
acgcccaacgtccgcaccatcgccgagatcccgcaccgcctccagggcgaccgggtcccc
gagctggtcgagatccgcggggaggtctacttcccgatggagaagttcctggagctcaac
gagcgcctggtggccgacggcaagccgccgttcgccaacccccgcaacgccgcggccggt
tcgctgcgccagaaggaccccaaggtcaccgccacccgcccgctgcacatggtggtgcac
ggcctcggcgcccgcgacggcctggagatcgaccgcctctccgaggcgtacgacctgctc
aaggagtggggcctgcccaccgccacgcacaaccgcgtggtggactccctcgccgcggta
cgggagttcatcgcccactacggcgaccccgagacccgccgcacggccgtcgagcacgag
atcgacggcgtcgtggtcaagctcgacgagatccggctccagggccggctgggcgccacc
tcgcgggcgccgcgctgggcgatcgcctggaagtacccgccggaggaggtcaacaccaag
ctggtggacatccgcgtcggcgtcggccgcaccggacgggtcacgccgtacgcggtcgtc
gagccggtcaccgtcgccggttccgaggtggagttcgccaccctgcacaaccaggacgtg
gtcaaggccaagggcgtcctgatcggcgacaccatcgtcatccgcaaggcgggcgacgtc
attccggagatcctcggcccggtcgtcgatctgcgggacggcaccgagcgggagttcgtg
atgcccgccgagtgccccgagtgcggctcggcgctccagcccgccaaggaaggcgacatc
gacctgcggtgccccaacgcccggtcctgccccgcccagatccgcgagcggctgttctac
ctcgccggccgcaagtgcctggacatcgagaacttcggctatgtcgccgccaccgccctc
agccagccgctggagcccgccgagccgccgctgacggacgagggcggcctgttcgacctc
tccgtcgaggagctgctgcccatcaagtcccatgtcctcgacccggacaccggcctgccc
aagcgcgacccgaagaccggcgaggagaaggtcgtcaccttcttcgccaaccagaagggc
gagccgaagaagaacaccctggccatgttggagaacatccaggccgccaaggagcgcccg
ctggcccggatcctcaccgggctgtcgatccgtcacgtgggcccggtggcggcgcaggcg
ctggcccgggagttccgctcgatcgaccggatccgggaggcgagcgaggaggaactggcg
gccgtggagggcgtcggcggcaccatcgccgcctccctcaagcagtggttcgccgtggac
tggcaccaggagatcatcgagcgctggcgggccgcgggcgtccgtatggaggaggagcag
tcgggtgaaacgggcccgcgtcccctggaaggcgtcaccgtcgtggtaacgggcacactt
cagtcacacaccagagatggcgcgaaagaagcgctacaggctcttggtgcgaaggtgacc
ggatccgtttccaagaagaccggattcgtagtggtgggcgacaaccccggttcgaagtac
gacaaagccatgcagttgaaggtccccgtgttggacgacgacggcttcgctgtgctgctg
gagcagggtcccgaggcggcacgagcggtagctgtcactccgcctgaggaggagtga

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