Streptomyces sp. JH002: H7827_15975
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Entry
H7827_15975 CDS
T11115
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
strj Streptomyces sp. JH002
Pathway
strj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7827_15975 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strj03400
]
H7827_15975 (nth)
Enzymes [BR:
strj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H7827_15975 (nth)
DNA repair and recombination proteins [BR:
strj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7827_15975 (nth)
Prokaryotic type
H7827_15975 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XVJ76975
LinkDB
All DBs
Position
3521924..3522862
Genome browser
AA seq
312 aa
AA seq
DB search
MNATANSADGERGAAGSAKPVRKPARSRAGGPAASGGSAGAGAAATPAKRTKQAKPESRT
AMVRRARRINRELAEVYYYAHPELDFENPFELLVATVLSAQTTDLRVNQTTPRLFAAYPT
PAAMADADPADVEELIRPTGFFRNKTKSLIGLSTALRDRFDGEVPGRLEDLVSLPGVGRK
TAHVVLGNAFGKPGITVDTHFQRLVRRWKWTEQTDPDKIEAEVGAIFPKKDWTMLSHRVI
FHGRRICHSRKPACGACPIAHLCPSFGEGETDPEKAKKLLKYEMGGYPGQRLKPPADYPG
KPAPAAGGEPAG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgacggcgaattccgctgatggcgaacgcggggcggccgggtcggcgaaaccg
gtacgaaagcccgcgcgcagccgtgcgggcgggccggcggcgtcgggaggatccgccggg
gcgggcgcagccgccacccccgcgaagcggacgaagcaggcgaagccggagagccgtacg
gccatggtgcgccgggcccgcaggatcaaccgcgagctggccgaggtgtactactacgca
caccccgagctcgacttcgagaacccgttcgagctgctggtcgccaccgtgctgtccgca
cagaccaccgacctgcgggtgaaccagaccaccccccggctgttcgccgcctaccccacc
ccggcggcgatggcggacgccgacccggccgacgtggaggagctgatccgccccaccggc
ttcttccgcaacaagaccaagtcgctgataggactgtccacggccctgcgcgaccgcttc
gacggcgaggtgcccggccgcctggaggacctcgtctcgctgcccggcgtcggccgcaag
accgcccacgtggtgctcggcaacgccttcggcaagccggggataacggtcgacacccac
ttccagcggctggtgcggcgctggaagtggaccgagcagaccgacccggacaagatcgag
gccgaggtcggggcgatcttcccgaagaaggactggacgatgctctcgcaccgggtcatc
ttccacggccgccggatctgccacagccgcaagcccgcctgcggcgcctgcccgatcgcg
cacctgtgcccctccttcggggagggcgagaccgacccggagaaggcgaagaagctgctc
aagtacgagatgggcggctatccggggcagcggctgaagccgccggccgactacccgggc
aagcccgccccggcggccggcggcgagccggccggctga
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