Streptomyces sp. JH002: H7827_23540
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Entry
H7827_23540 CDS
T11115
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
strj Streptomyces sp. JH002
Pathway
strj00300
Lysine biosynthesis
strj00550
Peptidoglycan biosynthesis
strj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
strj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H7827_23540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H7827_23540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
strj01011
]
H7827_23540
Enzymes [BR:
strj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
H7827_23540
Peptidoglycan biosynthesis and degradation proteins [BR:
strj01011
]
Precursor biosynthesis
Amino acid ligase
H7827_23540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
XVJ78319
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Position
5125363..5127066
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AA seq
567 aa
AA seq
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MRTITEGEGNAPLGAASGRTSLRGTPTTPGTLTAVPHADLTPSAPPRPARVSPVPLAQLA
GLLGVAEPAAAHAGAAVTGITHDSRAALPGDIYAALPGARFHGADFCAQAASRGAVAVLT
DPTGVERAAAAGLPVLTVPDPRTRMGQLAATIYGEPGAGLLKIGITGTSGKTTTAYLVEG
GLRAVAKEGEPTGLIGTVETRIGDQRVKSERTTPEATELQGLFAVMRERGVTSLAMEVSS
HALVMGRVDGVVFDVAVFNNLSPEHLDFHPDMADYYAAKAQLFTKARAQAGVVNIDDEYG
RRLAGEAEIPITTFSAEGHPDADWRAGDVTLGPLGSTFTAIGPGGVRVSATAPLPGPFNV
ANTLGAIAALAVAGIDPVTAAGGIATVPGVPGRLERVDAGQPYLAVVDYAHKPDAVESVL
YALRKVTEGKVHAVLGCGGDRDPHKRPAMGAALARLADTAVLTSDNPRSEDPLAILAAML
AGAAEVPVHERGTVLLEEDRAAAIALAVARAEAGDTVLVAGKGHELGQDIAGVIRPFDDR
TELRAAIERAAVAHPPSRHNATRGPLK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtgagaacgatcaccgagggcgaaggaaacgccccgctgggcgcggcatccggccgcacc
tcacttcgcggcacccccaccacgccgggtacgctcaccgccgtgccccacgctgatctc
accccgtcggcgccgccccgcccggcacgggtctcccccgtaccgctggcgcagctggcc
gggctgctgggggtcgccgaacccgccgccgcgcacgccggtgccgccgtcaccggcatc
acccacgactcgcgcgccgccctcccgggtgacatctacgccgcgctgcccggcgcccgc
ttccacggcgccgacttctgcgcccaggccgcgagccgcggcgcggtggccgtactcacc
gatcccaccggcgtcgaacgcgctgccgccgccgggctgcccgtcctcacggtgcccgac
ccccgcacccggatgggtcagctggccgccaccatttacggcgagcccggcgccgggctg
ctgaagatcggcatcaccggcacctccggcaagaccaccaccgcctacctggtggagggc
ggcctgcgcgcggtggccaaggagggcgagccgaccgggctgatcggcacggtcgagacc
cgcatcggggaccagcgggtgaagtccgagcgcaccaccccggaggccaccgagctgcag
ggactgttcgccgtgatgcgcgaacgcggagtgacctcgctcgccatggaggtctccagc
cacgcgctggtgatgggccgggtggacggcgtcgtcttcgacgtggcggtcttcaacaac
ctcagccccgagcacctcgacttccaccccgacatggccgactactacgccgccaaggcg
cagctgttcaccaaggccagggcccaggccggggtcgtcaacatcgacgacgagtacggc
cgccgcctcgccggtgaggccgagatcccgatcaccaccttctccgccgagggccacccg
gacgccgactggcgcgccggggacgtcaccctgggcccgctcggctccaccttcaccgcc
atcgggcccggcggggtacgggtgtccgccaccgcgccgctgcccggcccgttcaacgtc
gccaacaccctcggtgccatcgccgccctggccgtggccggcatcgacccggtcaccgcg
gccggcggcatcgccaccgtccccggcgtcccggggcgcctggagcgggtggacgcgggg
cagccctacctcgccgtcgtggactacgcgcacaagccggacgccgtcgaatcggtgctg
tacgccctgcgcaaggtcaccgagggcaaggtgcacgccgtgctgggctgcggcggcgac
cgcgacccgcacaagcggcccgcgatgggcgccgcgctcgcccggctcgccgacaccgcc
gtgctcacctccgacaacccgcgctccgaggacccgctggccatcctcgccgcgatgctc
gccggcgccgccgaggtgcccgttcacgagcgcggcaccgtcctcctggaggaggaccgc
gccgccgccatcgccctggccgtcgcccgcgccgaggcgggcgacaccgtcctggtggcc
ggcaagggccacgagctgggccaggacatcgccggagtcatccggcccttcgacgaccga
accgaactgcgtgccgccatcgagcgggccgcggttgcccatccgccctcacgccacaac
gccacgcgaggcccactgaagtga
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