KEGG   Streptomyces sp. Mg1: M444_03660
Entry
M444_03660        CDS       T03958                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
strm  Streptomyces sp. Mg1
Pathway
strm03030  DNA replication
strm03410  Base excision repair
strm03420  Nucleotide excision repair
strm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:strm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M444_03660
   03410 Base excision repair
    M444_03660
   03420 Nucleotide excision repair
    M444_03660
   03430 Mismatch repair
    M444_03660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:strm03032]
    M444_03660
   03400 DNA repair and recombination proteins [BR:strm03400]
    M444_03660
Enzymes [BR:strm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     M444_03660
DNA replication proteins [BR:strm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     M444_03660
DNA repair and recombination proteins [BR:strm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     M444_03660
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M444_03660
   MMR (mismatch excision repair)
    DNA ligase
     M444_03660
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      M444_03660
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_5 HHH_2 BRCT Nlig-Ia HHH PTCB-BRCT HHH_3
Other DBs
NCBI-ProteinID: AKL64656
UniProt: B4V767
LinkDB
Position
1:780154..782244
AA seq 696 aa
MTTLTAAQALSSTSGTSGPAALTGRSEYEAALRRLREASQAYYGDGDSVMDDASYDRLRL
ALLAWETEHPAEVAPGSPTTLVADGAAPAGDVAHTTRLLSLDNVFDAEGLVAWGASVERR
LGRAPAGGFTVEPKIDGAAVAARYRGGRLVRIVTRGDGSQGEDISHVIGQIDGLPELLAG
EATVEVRGEVAFTQEQFEVANAVRVAHGAPVFANPRNGTAGTLRAKDRPYRLRMTFWAYG
AVELEGVPFLPAGATQAEALAAVAAAGVRTTAAAGAGLHIVDDLAGAQQAVDAMAAMRAE
LPVGIDGVVIKLNDTAEQEAIGSGTRFPYWAIAVKLPAVERQTVLEDVVWEVGRTGVLAP
TAVLAPVEIDGSTVTRATLHNPADIRRRDLHIGDTVTVYKAGDIIPRVQAAVALLRPAGA
KPVPLPETCPRCGGEINTAQERWRCAKGTSCALPALIEYAAGREMLDIDGLGKTYVAALV
DSGDVTDVADLFTLTLEQLTAASGSSRRAAKLAEQIEAAKARPLSRVFCALGVLGTGRSM
SRRIARHFVTMEAIRRADAAEMQDVEGIGPEKAPVIVEQVAALAPVIDKLIAAGVTLHEP
EASATASAGGPLDGKVVVVTGKMAGPLEGFGRTEMNALIEKAGGRAGSGVSARTSVLVCA
PSASGKPSSKAVKAAELGVEVLTPEAFAELVADYLP
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgacgacacttaccgccgcccaggcgctgtccagcacgtccggcacgtccggccccgcc
gccctcaccggccgcagcgagtacgaggccgcgctccggcgcctgcgcgaggcctcgcag
gcgtactacggcgacggtgacagcgtcatggacgacgcctcgtacgaccggctccggctg
gccctcctggcctgggagacggagcaccccgccgaggtcgcgcccggctcccccaccacc
ctggtcgccgacggggcggcgccggccggcgatgtcgcgcacaccacccgtctgttgagc
ctggacaacgtcttcgacgccgagggcctggtggcctggggcgcctccgtcgagcgccgg
ctggggcgcgccccggccggcgggttcaccgtcgagcccaagatcgacggcgcggcggtg
gccgcccgctaccgtggcggccgcctcgtgcggatcgtcacccgcggcgacggcagccag
ggcgaggacatcagccacgtcataggccagatcgacggcctccccgagctgttggccggg
gaggccaccgtcgaggtgcgcggcgaggtggccttcacccaggagcagttcgaggtggcg
aacgcggtccgggtcgcccacggcgcaccggtcttcgccaacccccgcaacggcacggcg
ggcacgctgcgggcgaaggaccggccgtaccggctccggatgacgttctgggcctacggc
gcggtggagctggagggcgtaccgttcctgcccgccggggccacgcaggccgaggccctg
gccgccgtggccgcggccggggtgcggacgaccgcggccgccggcgccggactccacatc
gtcgacgacctcgccggggcgcagcaggcagtcgacgcgatggcggcgatgcgcgcggaa
ctgcccgtcggcatcgacggcgtggtcatcaagctgaacgacacggccgagcaggaggcc
atcggctcgggtacgcggttcccgtactgggccatcgcggtcaagctgcccgcggtcgag
cggcagacggtcctggaggacgtggtgtgggaggtcggccgcaccggcgtcctggccccg
accgcggtgctcgccccggtcgagatcgacggctccaccgtcacccgggccacgctgcac
aaccccgccgacatccgccgccgcgacctccacatcggtgacacggtgacggtgtacaag
gccggtgacatcatcccgcgcgtccaggcggccgtggccctgctccgaccggccggggcg
aagccggtaccgctgcccgagacgtgcccccgctgtggtggcgagatcaacaccgcccag
gagcggtggcggtgcgcgaagggcacctcgtgcgcgctcccggcgctgatcgagtacgcc
gccgggcgcgagatgctcgacatagacggcctcgggaagacgtatgtggcggccctggtc
gattccggggacgtcaccgacgtcgccgacctcttcaccctcaccctggagcagctcacc
gcggcgtccggcagctccaggcgggccgccaagctcgccgagcagatcgaggcggccaag
gcccgcccgctgagccgcgtcttctgcgccctgggggtgctcggcaccgggcgcagcatg
tcccgtcgtatcgcgcggcacttcgtcacgatggaggcgatccgccgggccgacgcggcc
gagatgcaggacgtggagggcatcggcccggagaaggccccggtcatcgtcgagcaggtc
gccgccctggccccggtcatcgacaagctgatcgcggcgggcgtcaccctgcacgagccc
gaggcttccgcgacggcgtccgccgggggcccgctggacggcaaggtcgtcgtggtcacc
ggcaagatggccgggcctctggagggcttcggccggaccgagatgaacgccctgatcgag
aaggcgggcgggcgcgcgggcagcggcgtcagtgcccggacgtccgtcctcgtctgcgcg
ccgtccgcgagcggcaagccgagctcgaaggcggtcaaggccgccgagctcggtgtcgag
gtcctcacgccggaggccttcgccgagctggtcgccgactacctgccctga

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