Streptococcus sp. NPS 308: SNAG_1270
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Entry
SNAG_1270 CDS
T05541
Symbol
pdg
Name
(GenBank) ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
strn
Streptococcus sp. NPS 308
Pathway
strn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SNAG_1270 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strn03400
]
SNAG_1270 (pdg)
Enzymes [BR:
strn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SNAG_1270 (pdg)
DNA repair and recombination proteins [BR:
strn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SNAG_1270 (pdg)
Prokaryotic type
SNAG_1270 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
TRAPPC9-Trs120
Motif
Other DBs
NCBI-ProteinID:
BAV80143
UniProt:
A0A1E1GBH7
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All DBs
Position
complement(1242138..1242767)
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AA seq
209 aa
AA seq
DB search
MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFAAF
PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVG
RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSASPLEVEKRVMDILPPEKWLAAHQ
AMIYFGRAICHPKNPECDHYPQLYDFSSL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgtcaaaaaaacgagcacgtaaagtgctagaagaaatcatagctctcttccca
gatgccaaacccagccttgattttaccaatcactttgaactattggttgcagtgatgttg
tcagcccagacgacagatgctgcagtcaacaaggctacaccaggtctctttgctgctttt
ccaacgcctcaagccatgtctgtggcaactgaaagtgaaattgcttcgcacatttctcgc
ttgggactgtatcgcaataaagccaagtttttaaaaaaatgtgcccaacaattattagac
gattttgacggacaagtacctcagactcgcgaggaattagaaagcttagcaggtgttggt
cgcaaaacagcaaatgtcgtcatgagcgtgggctttgggattccagcctttgcagtggac
acccatgttgagcgtatctgcaagcaccatgatattgtcaaaaaatcggcttcacccctc
gaagtagaaaaacgtgttatggacattctgccaccagagaaatggttggcagcccaccaa
gccatgatttactttggacgggctatctgtcatccaaaaaatccagaatgcgatcactat
cctcaattatatgattttagttcgttataa
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