KEGG   Salmo trutta (river trout): 115147539
Entry
115147539         CDS       T08542                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115147539
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115147539
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115147539
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115147539
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115147539
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115147539
  Exosomal proteins of epithelial cells
   115147539
  Exosomal proteins of breast milk
   115147539
SSDB
Motif
Pfam: C1-set C2-set_2 Ig_3 MHC_II_beta Cna_B C2-set_3
Other DBs
NCBI-GeneID: 115147539
NCBI-ProteinID: XP_029545630
Ensembl: ENSSTUG00000037824
LinkDB
Position
14:complement(79922139..79957834)
AA seq 260 aa
MMACLQSYLLFVVMFSFFTPTDGHFITTLDLCYYRGEDPHDVEYIWRAISDMVKVMEYNS
TLNRFTGYTPTGKHKAEQFNADPVVLASFQTPLHFFCKYYGALAYKAGLNSNVEPSVHLR
SMTPHSDRHPSMLTCSAYKFYPKQIRVTWLRNGQEVTSNMTSSEELANGDWHYQIHSYLE
YTPTPGEKISCMVEHASFTEPKILHWDMSLPESGRNKIAIGASGLVLGVVFAAAGLLYYN
RRKTTGGGGRELVPTSHPSQ
NT seq 783 nt   +upstreamnt  +downstreamnt
atgatggcttgcttgcagtcatatttgttgtttgtggttatgttttcattcttcactcca
actgatggacactttatcaccaccctcgacctttgttattacagaggggaagatccacac
gatgtggagtacatctggagagctatttcagacatggtgaaggttatggaatacaacagc
actctcaatagatttactggttacacacccactgggaaacataaggctgagcaatttaac
gcagatcccgtggtcctggcatcgtttcaaactccacttcatttcttctgcaaatattat
ggtgccctcgcctacaaagctggattgaacagcaatgttgagccctccgttcatctgagg
tccatgacaccccacagtgacagacacccctccatgttgacttgcagcgcctacaagttc
taccccaaacagatcagggtgacctggttgaggaatggacaggaagtgacctcaaacatg
acttcctctgaggagctagccaatggcgactggcactaccagatccactcctacctggag
tacactcccacacctggagagaagatctcctgcatggtggagcatgccagcttcactgaa
ccaaagattctccactgggacatgtctctgccagagtctgggagaaataagatagccatc
ggggcgtctgggctggtgctgggggtggtctttgctgcagctggtctcctctactacaac
cggaggaagaccactggtggtggtgggagggaattggtgccaacaagtcacccatcccag
tga

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