KEGG   Salmo trutta (river trout): 115147540
Entry
115147540         CDS       T08542                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115147540
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115147540
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115147540
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115147540
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115147540
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115147540
  Exosomal proteins of epithelial cells
   115147540
  Exosomal proteins of breast milk
   115147540
SSDB
Motif
Pfam: C1-set Ig_3 ig Ig_2 MHC_II_alpha C2-set_2 I-set APG12
Other DBs
NCBI-GeneID: 115147540
NCBI-ProteinID: XP_029545631
Ensembl: ENSSTUG00000037834
LinkDB
Position
14:complement(79981941..79984210)
AA seq 235 aa
MMMALVFMILLFMVSSTQGQEQHVFNVINARSETEEFNMTIVVDDNEYLHVYLNNKEGVV
TLPEWVNYVDCPICVRVAESRRADLNNDIKLFSLETPEAKVPPEIKLYAKDEVKLGINNS
LVCFVNNFFPPPVQVKWTKNDENIPKGVKVGQYATNSDYTFYRFSTLTFEPQEGDIYTCI
VDHTALDEPLTRTWEFEVPPRASVGPAVFCGLGLTLGLLGVATGTFFLVKGTQCQ
NT seq 708 nt   +upstreamnt  +downstreamnt
atgatgatggctcttgtgtttatgattctgcttttcatggtgagttctacacaaggacaa
gagcaacatgtattcaatgtcataaacgcacgttctgaaactgaggaatttaacatgacc
attgtagtggacgataatgaatatctccatgtatatttaaacaacaaagaaggcgtggta
acgttgccagaatgggtaaattatgtagattgtcctatttgcgtcagagttgcagagagc
cgaagagcagatcttaacaatgacattaaactcttcagccttgaaaccccagaagctaaa
gttcctcctgagatcaaattgtatgccaaggatgaagtgaaactgggaataaacaactct
ctcgtctgcttcgtcaataatttctttcctccgcctgtccaagtcaaatggaccaagaat
gatgagaacatccccaagggggttaaagtgggtcaatatgcaaccaacagtgattacact
ttctaccgtttctccactctgacctttgaaccacaagagggagacatctacacctgtatt
gtggatcacacagccctagatgaacctctaaccaggacatgggagttcgaggtgcccccc
cgtgccagtgttggtcctgctgttttctgtggactgggtctgactctggggctgctggga
gtcgctaccggaacattcttcctcgtcaaaggaacccaatgtcaatga

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