Salmo trutta (river trout): 115147658
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Entry
115147658 CDS
T08542
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00514
Other types of O-glycan biosynthesis
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115147658
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115147658
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115147658
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115147658
Glycosyltransferases [BR:
stru01003
]
Glycan extension
O-Glycan
115147658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
115147658
NCBI-ProteinID:
XP_029545810
Ensembl:
ENSSTUG00000002333
LinkDB
All DBs
Position
14:82447584..82475447
Genome browser
AA seq
392 aa
AA seq
DB search
MSKGVWRKRALSTAGGALFTCLVMMFLLVAVIKHRGTLVEEGSTGREFGTRSLQSLNSMN
NNDKPVNQAPAEDRVGDKCQAAQVKGFSAYFSELSRGKRAVEHRAVKASDPTPVEELSPA
DVFIAVKTTKKYHHTRLDLLLDTWISRNMLQTYIFTDGEDDRLRKRMGSHMINTNCSAAH
SRQALSCKMAVEYDTFISSDKKWFCHVDDDNYVNIRPLVKLLSHYSHAHDVYIGRPSLDR
PLEATERFGDSHTVRDQERPVRFWFATGGAGFCVSRGLALKMSPWASGGNFMTTADRIRL
PDDCTVGYIIEALLGVGLIRSPLFHSHLENLQLVSPTQIHHQVTLSYGTFDSKRNIINVR
GALSLDEDPTRFRSVHCVIYPDTPWCSALTWY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggtgtctggaggaaacgcgccctctccacggctggaggagccttgttcacc
tgcctcgtgatgatgtttcttctcgtcgccgttatcaaacaccgggggactctcgtggag
gaaggttccaccgggagagagttcgggactcgctccctgcaaagtttaaacagcatgaat
aataatgacaaacccgttaaccaagctccagccgaggatcgggtcggggacaaatgtcag
gcggcccaggtcaagggtttttcggcgtacttcagtgagttgagccgggggaaacgggcg
gtggagcacagagcggtgaaggctagtgatcctacaccggtggaggagctcagtccggcg
gatgtgttcatagcggtgaaaaccaccaagaaataccaccacaccaggctggatctactg
ctggacacatggatctctagaaacatgctgcagacgtacatattcaccgacggagaggat
gacaggctgaggaagaggatggggagtcacatgatcaatactaactgttcagcggcccac
agtcgccaggctctgtcctgtaaaatggccgtcgaatacgacaccttcatcagctctgac
aagaagtggttctgccacgtggatgatgataactacgtgaacatacgtccccttgtgaag
ctcctgtctcactacagccatgcccacgacgtctacattggccggcctagcctcgaccga
ccgctagaagccaccgagaggtttggcgactcccacacggtaagggaccaggagcgtcca
gtgcgtttctggtttgccacaggaggggcagggttctgtgttagtcgaggtctcgccctc
aagatgagcccctgggccagtggaggtaatttcatgacaacagctgatcgtattcgtctc
cctgacgactgtacggttggttacatcattgaggcgttgcttggggtgggtcttatccgc
tccccactgttccactctcacctggaaaaccttcagctggtgtcaccgacacagatacac
caccaggtgactctgagttatggaacgtttgatagtaagagaaacataatcaacgtaaga
ggagctctctcattggacgaagaccctaccaggttcaggtctgtccattgtgtcatatac
ccagacactccgtggtgttcagccctgacctggtactga
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