KEGG   Salmo trutta (river trout): 115148612
Entry
115148612         CDS       T08542                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115148612
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115148612
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115148612
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115148612
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115148612
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115148612
  Exosomal proteins of epithelial cells
   115148612
  Exosomal proteins of breast milk
   115148612
SSDB
Motif
Pfam: C1-set Ig_3 MHC_II_alpha ig C2-set_2 Ig_2 C2-set_3
Other DBs
NCBI-GeneID: 115148612
NCBI-ProteinID: XP_029546516
Ensembl: ENSSTUG00000009784
LinkDB
Position
15:complement(21333634..21340327)
AA seq 273 aa
MSLEMNYSVIILILTGAVCTSAEIHHEIHFIYGCFESSDPAVGLEIDGDEVFYGDFNKNS
NTCLIADVAFTLPKFISITPEDKERACEYATISRVWCKDCIAWGKQSEPKIPKIKVSGFC
CPLDAPESTIYPRDEVELGVENTLICFVNDFFPPPVKVNWTKNGMEVTEGLSLSRYYPNK
DGTFHQFSSLSFTPQKEDVYICAVAHTALKDPKTREYKVSGSSAGPGPAVFCGVGLTLGL
LGVATGIFLIYKGKRATESQEYSWEVRHWTREI
NT seq 822 nt   +upstreamnt  +downstreamnt
atgagcttagagatgaattactctgtgattatactgattctcactggagccgtttgcact
tctgcagaaattcatcatgaaattcactttatctacggatgctttgagtcaagtgatcct
gcggtgggacttgagattgatggagatgaagtcttctatggtgacttcaataaaaacagt
aatacatgtctaatagcagatgtagcgtttacattacctaaattcatatctattacacca
gaggataaagaaagggcttgtgaatatgctaccattagcagagtttggtgcaaagactgc
atcgcatggggcaaacagtctgaaccgaaaataccaaaaatcaaagtttcaggcttttgt
tgccctctagatgcccctgagagcaccatctaccccagggatgaggtggaactgggggtg
gagaacaccctcatctgctttgtgaatgatttctttcccccgcctgtcaaagtcaactgg
accaagaatggaatggaggtgactgagggattgtctctcagtcgttactatcctaataaa
gatggaacgttccaccagttctccagcctgagtttcaccccacaaaaggaagacgtctac
atctgcgctgtggcgcacacggccctgaaggaccccaaaaccagggaatataaggtcagt
gggtccagtgctggtcctggtcctgctgtattctgtggagtgggcctcactcttgggctg
ctgggggtggctactggaatattcttaatctacaaaggaaagagagccactgagtctcag
gaatacagttgggaagtgaggcactggactagagagatctag

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