Salmo trutta (river trout): 115148612
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Entry
115148612 CDS
T08542
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115148612
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115148612
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115148612
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115148612
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115148612
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115148612
Exosomal proteins of epithelial cells
115148612
Exosomal proteins of breast milk
115148612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
MHC_II_alpha
ig
C2-set_2
Ig_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
115148612
NCBI-ProteinID:
XP_029546516
Ensembl:
ENSSTUG00000009784
UniProt:
A0A673XDF5
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Position
15:complement(21333634..21340327)
Genome browser
AA seq
273 aa
AA seq
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MSLEMNYSVIILILTGAVCTSAEIHHEIHFIYGCFESSDPAVGLEIDGDEVFYGDFNKNS
NTCLIADVAFTLPKFISITPEDKERACEYATISRVWCKDCIAWGKQSEPKIPKIKVSGFC
CPLDAPESTIYPRDEVELGVENTLICFVNDFFPPPVKVNWTKNGMEVTEGLSLSRYYPNK
DGTFHQFSSLSFTPQKEDVYICAVAHTALKDPKTREYKVSGSSAGPGPAVFCGVGLTLGL
LGVATGIFLIYKGKRATESQEYSWEVRHWTREI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcttagagatgaattactctgtgattatactgattctcactggagccgtttgcact
tctgcagaaattcatcatgaaattcactttatctacggatgctttgagtcaagtgatcct
gcggtgggacttgagattgatggagatgaagtcttctatggtgacttcaataaaaacagt
aatacatgtctaatagcagatgtagcgtttacattacctaaattcatatctattacacca
gaggataaagaaagggcttgtgaatatgctaccattagcagagtttggtgcaaagactgc
atcgcatggggcaaacagtctgaaccgaaaataccaaaaatcaaagtttcaggcttttgt
tgccctctagatgcccctgagagcaccatctaccccagggatgaggtggaactgggggtg
gagaacaccctcatctgctttgtgaatgatttctttcccccgcctgtcaaagtcaactgg
accaagaatggaatggaggtgactgagggattgtctctcagtcgttactatcctaataaa
gatggaacgttccaccagttctccagcctgagtttcaccccacaaaaggaagacgtctac
atctgcgctgtggcgcacacggccctgaaggaccccaaaaccagggaatataaggtcagt
gggtccagtgctggtcctggtcctgctgtattctgtggagtgggcctcactcttgggctg
ctgggggtggctactggaatattcttaatctacaaaggaaagagagccactgagtctcag
gaatacagttgggaagtgaggcactggactagagagatctag
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