Salmo trutta (river trout): 115148613
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Entry
115148613 CDS
T08542
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like
KO
K06752
MHC class II antigen
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115148613
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115148613
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115148613
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115148613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115148613
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115148613
Exosomal proteins of epithelial cells
115148613
Exosomal proteins of breast milk
115148613
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
Psg1
Ig_3
Cna_B
C2-set_3
DUF3040
Motif
Other DBs
NCBI-GeneID:
115148613
NCBI-ProteinID:
XP_029546518
Ensembl:
ENSSTUG00000009777
LinkDB
All DBs
Position
15:complement(21322740..21326263)
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AA seq
260 aa
AA seq
DB search
MYVLNFFSIHLLLLFSSLSEVVDSSDEDFAHDDAWCRFSSRDLHNMEYILEHHFNKIMVA
QYNSTTERWTGYTAWGVISAEKWNEDPDEIPRRRTDMDVLCKPYANRIYNATEMFMVEPN
VTLRLEGPSSDSSLVCSVHFFYPKHIRVTWLRNGEEVTSDVTSTDVLANGLWSYQIQSYL
KYTPTTGERITCMVEHISQTEPKLYYWDPSLPKSEKNKIVIGVCGLLLGVVFVVAGLIYW
TKSTGRLLGLIGERDYGTCD
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgctgaatttcttctccatccacctgctgctcctcttctcctctctgtctgaa
gtggttgattcctcagatgaagattttgcacacgatgatgcatggtgtaggtttagctcc
agagatttacataatatggagtatattttagagcatcattttaacaagatcatggtggct
cagtacaacagcaccacagagaggtggacaggatacacagcatggggagtgatatctgca
gaaaagtggaatgaggacccagatgagatccccaggaggagaacagatatggatgtgtta
tgcaagccatatgctaatcggatctacaacgcaacagagatgtttatggttgagcccaac
gtcacactgaggctagaggggccatccagtgactccagccttgtgtgtagcgtccacttc
ttctaccccaaacacatcagagtgacgtggctgaggaacggggaggaagtgacctcagat
gtgacctccactgacgtactggccaatggactctggagctaccagatacagtcctatttg
aagtacacacccacaactggagagagaatcacctgtatggtggagcacatcagccagact
gagcccaaactttattactgggacccctccttgcctaagtctgagaagaataagatagtg
atcggtgtctgtgggctgctgctgggggtggtctttgtagtagctggactgatctactgg
acgaaatctactggacggctgttgggtcttattggtgaacgtgattatgggacttgtgat
tga
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