KEGG   Salmo trutta (river trout): 115148613
Entry
115148613         CDS       T08542                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115148613
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115148613
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115148613
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115148613
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115148613
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115148613
  Exosomal proteins of epithelial cells
   115148613
  Exosomal proteins of breast milk
   115148613
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta Psg1 Ig_3 Cna_B C2-set_3 DUF3040
Other DBs
NCBI-GeneID: 115148613
NCBI-ProteinID: XP_029546518
Ensembl: ENSSTUG00000009777
LinkDB
Position
15:complement(21322740..21326263)
AA seq 260 aa
MYVLNFFSIHLLLLFSSLSEVVDSSDEDFAHDDAWCRFSSRDLHNMEYILEHHFNKIMVA
QYNSTTERWTGYTAWGVISAEKWNEDPDEIPRRRTDMDVLCKPYANRIYNATEMFMVEPN
VTLRLEGPSSDSSLVCSVHFFYPKHIRVTWLRNGEEVTSDVTSTDVLANGLWSYQIQSYL
KYTPTTGERITCMVEHISQTEPKLYYWDPSLPKSEKNKIVIGVCGLLLGVVFVVAGLIYW
TKSTGRLLGLIGERDYGTCD
NT seq 783 nt   +upstreamnt  +downstreamnt
atgtatgtgctgaatttcttctccatccacctgctgctcctcttctcctctctgtctgaa
gtggttgattcctcagatgaagattttgcacacgatgatgcatggtgtaggtttagctcc
agagatttacataatatggagtatattttagagcatcattttaacaagatcatggtggct
cagtacaacagcaccacagagaggtggacaggatacacagcatggggagtgatatctgca
gaaaagtggaatgaggacccagatgagatccccaggaggagaacagatatggatgtgtta
tgcaagccatatgctaatcggatctacaacgcaacagagatgtttatggttgagcccaac
gtcacactgaggctagaggggccatccagtgactccagccttgtgtgtagcgtccacttc
ttctaccccaaacacatcagagtgacgtggctgaggaacggggaggaagtgacctcagat
gtgacctccactgacgtactggccaatggactctggagctaccagatacagtcctatttg
aagtacacacccacaactggagagagaatcacctgtatggtggagcacatcagccagact
gagcccaaactttattactgggacccctccttgcctaagtctgagaagaataagatagtg
atcggtgtctgtgggctgctgctgggggtggtctttgtagtagctggactgatctactgg
acgaaatctactggacggctgttgggtcttattggtgaacgtgattatgggacttgtgat
tga

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