KEGG   Salmo trutta (river trout): 115149172
Entry
115149172         CDS       T08542                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115149172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115149172
   04121 Ubiquitin system [BR:stru04121]
    115149172
   03036 Chromosome and associated proteins [BR:stru03036]
    115149172
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     115149172
Transcription factors [BR:stru03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    115149172
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115149172
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115149172
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115149172
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_4 LRR_At1g61320_AtMIF1 Rubredoxin
Other DBs
NCBI-GeneID: 115149172
NCBI-ProteinID: XP_029547631
Ensembl: ENSSTUG00000032983
LinkDB
Position
15:complement(46973216..47021328)
AA seq 1410 aa
MAEDKHHGQGMFRLGSADGCVQDKVYFQCVNGERSICRTMYDENEDFSDVEEIANVRGFN
LEEKLVSNSYNRHFVQLMDGKDFTYEYVQREALQTPLIFKAKDGLGLRMPDPEFTVSEIK
GLVGSRRAVDVMDVSTQKGSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLVKR
PTVVDLVDWVDNMWPLKLKQRQTEATNVISEMKYPKVQKYCLMSVKGCYTDFHIDFGGTS
VWYHVFKGGKVFWLVPPTPHNLALYEDWVLSGKQSDVFLGDRVDGCQRVELKQGYTFFIP
SGWIHAVYTPEDTLVFGGNILHSFNIPMQLSIYEIENRTKVHSKFRYPFYNEMCWYVLER
YVHCLTKRSHLAPEFHREPLLIDLETKLSTESPSSDSRSQDMDEEDSCETRQERDERSDR
SAFDDPCSPDNRKGKPGAPQPLKAALDDSCIPTSIQPPEFPKTPSGSPGSESQSKWTHLT
EFELKGLKALVEKLEALPENKKCVPDGMEDPQALLDDMKVVLKEHEDDDPKMAATGVPVV
CWPKKSATQQRPPNRPKPKMTASSPAAAVKLSASRSTSGARRRRTRCRKCEACLRTECGE
CHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEDKFNLMLM
ECSICNEIVHPLCLKVKNSGGVVNEELPNCWECPKCNHAGKTGKAVKQKRGPGFKYASNL
PGSLLKDSRLNRDVKEESDLPSVPTSPTVVKRKAERDDTPKRKAEEYPPLKKRSPMLSLG
GLPHPRPRPEDNPLRKKRKLFDIKDEDEPPVVKKKKKPPKPDDTFTSKLLRPIKQEKVDE
DEDHEDDRYTGDRVAAKGKRDEDEDKEDDEEEEEEKNGVEDSKGGKVKTMLSPLLLTSVA
RESDQSCSSSPRAGPSSEGGDAPEKTLGQLKALQRRRLPNKELSKELSKELNLEIQKTED
CLANQNRRPLKGENSPTNNNRRPLKTEDSSINQNRRLLKTEDSPTNHNRRPIKTEDGLSN
HNRRPLKTEDSLANQNHRPMKTEPESDGEEPKPKRPLDNGSSDLGDWLHPRGREVNGTPR
QLSPLGWNRSPPITPICPRPPPCHSPPKCVQMERHVIRPPPISPPPDRLPLDDGQAHVMR
REVWMVVFGHLAHRDLCVCMRVCKTWNRWCCDKRLWTQIDLNRCKSITPLMLSGIIRRQP
VALDLSWTNISKKQLSWLINRLPGLRMLLLSGCSWVAVSALCTASCPLLRTLDVQWVEGL
KDAQMRDLLSPPTDNRPGQLDNRSKLRNVVDLRLAGLDITDTSLRLLIRYMPQLTRLDLS
YCNHVTDQSVNILTAAGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQV
TKEGCEQFIAEMSVSVQFELVEEKLLLKLS
NT seq 4233 nt   +upstreamnt  +downstreamnt
atggccgaagacaaacatcacggacagggcatgtttcgtctaggaagtgctgacgggtgc
gttcaagacaaagtttatttccagtgtgtaaatggagagcgctccatctgccggacaatg
tacgacgaaaatgaggacttctctgacgttgaagaaattgcaaatgtcaggggttttaat
ctggaggagaaacttgttagcaattcgtacaacagacatttcgttcagttgatggacggc
aaagatttcacttatgagtatgttcaaagagaagcacttcagacccctcttattttcaaa
gccaaagatggactggggctcagaatgccagacccggagttcaccgtcagtgagattaag
ggtttggttggtagccgccgtgccgttgatgtgatggacgtgagcactcagaaaggctct
gagatgagcatggcccagtttgtccgctactatgagacgcctgaggaggagcgggacaaa
ctatttaacgttatcagcctggagttcagccacaccaaactggagaacctcgtcaagagg
cccactgtggtggatctagtggactgggtggacaacatgtggccccttaaacttaaacaa
agacaaactgaagccactaatgtcatctcagagatgaagtaccccaaagtacagaagtac
tgtttgatgagtgtgaagggctgctatactgacttccacattgatttcgggggcacgtct
gtgtggtatcacgttttcaagggaggaaaggtgttctggctggtgcctccgacacctcat
aaccttgccctgtatgaggactgggttctgtcaggcaagcagagtgacgtcttcctggga
gatcgtgtagatggctgccagagagttgagctaaaacagggctacaccttcttcatcccc
tccggctggattcatgcagtctacacccccgaggacacactggtgttcggaggcaacatt
ctgcacagctttaacattcccatgcaactctcaatctatgagatagagaacaggactaag
gttcattccaagttccgctacccgttctacaatgagatgtgctggtatgtcctggagagg
tacgtgcactgcctgaccaagcgctcccatctcgctccggagtttcacagagagcctctg
ctaatcgatttggagacgaagctgagcactgagagcccctcctctgactcgcggagtcag
gacatggatgaggaggactcctgcgagacgcggcaggaacgagatgaacggagtgacagg
tcagcatttgatgacccctgctctcctgataacaggaagggtaaaccaggcgctcctcag
cctctcaaagctgccttggatgatagctgcatccccacctccatccagcctccagagttc
cccaaaaccccctctggttcgccaggctcagagtctcagagtaaatggactcatttgact
gagtttgaactgaagggccttaaggccctggtggagaagctggaagcactccctgaaaat
aagaaatgtgtcccagatggcatggaggacccccaggccctgctggatgacatgaaggtt
gtcttgaaggaacatgaagacgatgatccaaaaatggctgccactggtgtacctgtggtg
tgctggcccaagaaatctgccacgcagcagagacctcccaacaggcccaaacccaaaatg
acggcctcgtctcctgcggctgcggtcaagctgtcggccagccggagcacgtctggggcc
cggaggaggaggacgcgatgtcggaagtgtgaggcgtgcctgaggacagagtgtggagaa
tgccacttctgtaaagacatgaagaagtttggagggccaggtcgcatgaaacagtcctgc
atcatgaggcagtgtatcgcgcctgtcctgccccacactgcggtgtgtctggtatgtggg
gaggcagggaaggaggacacagtggaggaagaggaggacaaatttaacctcatgctcatg
gagtgctccatctgcaatgagatagtccatccactctgcctcaaggtgaagaattctggt
ggagttgtaaatgaagagttgccaaactgctgggagtgtccaaaatgcaaccatgcaggg
aagaccgggaaagctgtcaagcaaaaaagaggaccaggattcaagtacgcgtccaacctt
cccgggtcgctactgaaggactcgcgattgaaccgtgacgttaaggaagagtccgacctg
cccagtgtgccaacatcacccactgtagtgaagaggaaggcagagcgtgatgacaccccc
aagaggaaagcagaggaatatcctcctctgaagaaacgttctcccatgttgtctctgggc
gggctacctcatccccgacccaggcctgaggacaaccctctgaggaagaagaggaagctg
ttcgacatcaaagatgaggacgaacctcctgttgtcaagaaaaagaagaagcccccaaaa
cctgatgacaccttcacctccaagctgttacggcccatcaagcaagagaaagttgatgag
gacgaagaccatgaagatgacagatacacaggggacagggttgcagctaaagggaaaaga
gacgaggatgaagataaggaggatgatgaggaggaagaagaggagaaaaatggtgtagag
gacagtaaaggcggtaaagtaaagactatgctgagtccactgctactgacgtctgtagcc
agagagagtgaccagtcctgctccagctctccccgggcagggcccagcagtgaggggggc
gatgccccagagaagacacttggccagctgaaggcactccagcgacgccgcctacccaat
aaagagctgagcaaggagctgagcaaagagctcaacctggagatccagaagaccgaggac
tgcttggccaatcagaaccgcagaccactgaagggggagaacagcccaaccaataacaac
cgtcgaccactgaagactgaggactcctctatcaatcagaaccgcagactactaaaaaca
gaggactcccccaccaatcataaccgcaggccaattaagactgaggatggcctatccaat
cacaaccgtcgaccattgaagaccgaggacagcttggccaatcagaaccacaggccaatg
aagacagagcctgagagtgacggggaggagcctaagcccaagcggccactcgacaacggt
agcagtgacctcggagactggctccaccccagggggagggaggtgaacgggacgccccgc
cagctctcgcccctggggtggaaccgcagccctccgatcacacctatttgcccacgcccc
cctccctgccactcaccgcccaaatgtgtacagatggagcgtcacgtgatccggccgcct
cccatcagccccccaccagacagacttcccctggatgacggacaggcccacgtgatgcgc
agggaggtgtggatggtcgtgtttggccacctcgcacacagagacctgtgtgtctgcatg
cgcgtctgcaagacctggaaccgatggtgctgtgataagagactgtggacgcagatcgat
ctgaaccgctgtaagtccatcactcccctcatgctgagtggcatcatccgcagacagcct
gtggctctggacctcagctggaccaacatctccaagaagcagctcagctggctcatcaac
agactgccaggtctgcggatgctgctgctctcaggctgctcctgggtggctgtgtctgcc
ctctgcaccgccagctgcccgctgctgcggaccctggacgtccagtgggtagagggtctc
aaagacgcccagatgagggatctgctctcaccccccacagacaacagaccaggtcagctg
gacaacaggagtaagctgcgaaacgtggtggacctgcgtctggccgggctggacatcacg
gacacctctctgcgcctcctcatccgctacatgccccagctgaccagactggacctgagc
tactgcaaccacgtcactgaccagtcagtcaacatcctgaccgctgcagggaccaccacc
agagactcgctcactgacatcaacctctccgtgtgcaacagagtcacggaccagtccctg
acctacttcaagcgctgtggaagcatctgtcatattgacttgcgctactgcaagcaggtg
accaaagagggctgcgagcaattcattgctgagatgtcagtgagtgtacagtttgaacta
gtagaggagaaactactgctgaaactcagctag

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