Salmo trutta (river trout): 115152047
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Entry
115152047 CDS
T08542
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115152047
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115152047
04261 Adrenergic signaling in cardiomyocytes
115152047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115152047
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115152047
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
DUF2201
Cache_3-Cache_2
VWA_CoxE
Fe_dep_repress
Motif
Other DBs
NCBI-GeneID:
115152047
NCBI-ProteinID:
XP_029552378
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Position
17:32109617..32240655
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AA seq
1076 aa
AA seq
DB search
MDTYRPHAVLILLLLSSDSCLPSQFPTQLMIKEWVDQIQLELVTLADTASAGKSLTQIFL
DNKNLYTVESNDAEELVARAARNIEQLLLKRAAALETLATAAENFQMEHQWEDEYADGDI
VYYNAKDNLEVNHTEGRKNRIRPAFKEDPLFKRFTSDNDTAVHIPTDIYDGSTIVLNELN
WTEALEDVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIKTSVSEMLETLSDDDYVNVVYFNTRVNNTACF
DHLVQANVRNKKILKDAIQNISAKGITNYTKGFEFAFEQLYATNITRANCNKIIMLFTDG
GEERASAILQEYNSDKKVRIFTFSVGQHNYDKGPVQWMACANKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADQLAKQVQWTNVYLDALELGLVITGTLPVFNKTKYKDELGIEIQNQL
ILGVMGIDVSLDDIKKLTPRYTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFL
DAELENNVKVQIRRIMIDGNPGEETIETLVKTQDERYIDIGVRTYTWAQVNGTDYSLALV
LPMYSEHYIQAKLGDTIRQAMAMDTLQVERFDELGHTFIAPREYCKGLKDKDNNTQFLLD
FNQFIDRNTVEEPCNMALVSRLLLDAGLTADLVKLWKEQTLRGVLARFVATDGGITRVYP
RSAGEEWTENAETYDSSFYKRTLDNDIYIFTAPYFNKSRESGYESGILVSKAVDLNIDRV
NLKPAVVGVKLNVSAWMNSFMNATMKVNCKDEICGCLKNDKHVDCVILDDGGFLLMSNQE
EYITQIGQFFGEVDPVVMISLVNTSLYSFNKTYDYQSVCNPERDCKAAAGPRSVYVPTIA
DMLSISWWASTGAWSIMQQLFYSLIFPRFLEAVDSDDDMSANMFKESCITEQTQYFFDNE
EKSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKTTCLSCDPRPLRQAEQPSQGPDRCE
LAQNPRYRKGPDVCFDNNVDEDDSDCGGGTSLSPSLWPMLGLQLLLLWLLTGPRHS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggacacctacagaccacacgccgtgttgattttactgttgttatcgtcggatagttgt
ctgccgtcgcagtttccaacacaactcatgataaaggaatgggtggatcagatacagcta
gagctggtgacactggcagacaccgccagtgccgggaagagcctcacacagatcttcctg
gacaacaagaacctgtacacagtagagtcgaacgatgcagaggaactagtggctagggca
gccaggaacatagaacagcttttactgaagagggctgccgctctggaaactctggccacg
gctgctgagaactttcagatggaacaccagtgggaggatgagtatgcggatggtgacatt
gtttactacaatgcaaaggacaatttggaggtgaatcacacagagggtaggaagaaccgg
atcaggccagcctttaaggaggacccgttgtttaaacgcttcacctctgataacgacact
gctgtacacatccctactgacatctacgatggctccaccatcgtgctgaatgagttgaac
tggacggaggcgctggaggatgtgtttaagaagaacagagaggatgaccctactctgctc
tggcaggtgtttggtagtgctactggactggcccgatactacccagcctctccatggatg
gatgctcggaagacccccagtaagattgacctgtacgatgtacgcaggaggccctggtac
attcagggagctgcctctcccaaggacatgctgatcctagtggacgcgagtggcagtgtg
tctggtctgactctgaagctgatcaagacctcagtcagtgagatgctggagactctgtct
gatgatgactatgtcaacgtagtttatttcaacaccagggtgaataacacagcgtgtttt
gaccacctggtccaggccaacgtgaggaataagaagatcctgaaggatgcgattcagaac
atctctgctaaaggcatcaccaactacaccaagggatttgagtttgccttcgaacagctc
tatgcaactaacatcactagagccaactgtaacaagatcatcatgctgttcactgacgga
ggagaggagagagcatcggccatacttcaggaatacaactctgacaagaaggtgcgtatc
ttcaccttctcagtaggtcagcacaactatgataaaggtccagtccagtggatggcctgt
gctaataaaggatacttctatgagattccctcaattggagccatacgcatcaacactcaa
gagtacctggatgtactgggcagacccatggttttagctgaccagctggccaagcaggtc
cagtggactaatgtctacctcgacgctctggagctaggtctggtcatcacaggaacccta
cctgtcttcaacaagaccaagtataaagatgaattgggcatagagattcagaaccagttg
atcctaggggtgatggggattgacgtgtcactagatgacatcaagaagctcacaccgcgc
tacactattggacctaatggatattattttgccatcgaccccaacggatatgtgctgcta
caccccaacctccaacctaagaaccctaaattccaggagcctgtcactctggacttcctc
gatgcggaactggagaacaacgtcaaagtccagatcaggagaattatgatagatgggaac
ccaggtgaagagaccatagagactctggttaaaactcaggatgagagatacatcgacata
ggagtaaggacgtacacctgggctcaggtcaatggaacagactatagcttggccctagtc
ctgccaatgtacagtgaacactacatacaggccaaactgggagacaccatcagacaggct
atggccatggacactctgcaggtggagaggtttgatgagttgggacacaccttcattgcc
cccagggagtactgcaaaggcctgaaggacaaggacaacaacacccagtttctcctagac
ttcaaccagttcattgacaggaacacagtggaagagccttgtaatatggctctggtcagt
aggctgctgttggatgctgggttgacagctgatctggtcaaactgtggaaggagcagaca
ttgcgcggagtcctggccaggtttgtagccactgacggagggatcactagagtctatccc
agaagtgctggggaggagtggacagagaatgccgagacctatgactcaagtttctacaag
aggactctggataacgacatctatattttcactgctccatatttcaacaagagcagggag
tcaggctatgagtcaggtattctggtgagcaaggctgtagacctcaacatagacagagtc
aacctcaaaccagcggtggtgggagtgaaactgaacgtctctgcctggatgaacagcttc
atgaacgccaccatgaaagtcaactgcaaggatgaaatctgtggctgtctgaagaatgat
aagcatgttgactgtgtcatcttggatgatggaggctttctgctgatgtccaatcaggag
gagtatatcacacagataggtcagttctttggggaggtggacccagtcgtgatgatcagt
ctggtcaacacgtctctgtactccttcaacaagacctatgactaccagtcagtctgcaac
cctgagagagactgcaaggctgctgcagggccacgatctgtttacgtgcccactatagca
gacatgctgagtataagctggtgggcctccacaggtgcctggtcgataatgcagcagctc
ttctacagtctcatattcccaaggttcctagaggcagtggactcagatgatgacatgtct
gctaacatgtttaaggagagttgtatcacagagcagactcagtatttctttgacaatgaa
gagaaatcctactcgggagtcctcgactgtggaaactgctccaggatgtatcgagctgag
aagctgcccaacactaacctggtgtttctgatcactgatgccaagaccacctgtctgtcc
tgtgaccccagaccactacgacaggcagagcaaccatcccaaggtccagatcgctgtgag
ctagctcagaaccccaggtacaggaaaggacctgacgtgtgttttgacaacaacgtagac
gaggatgattctgactgtgggggcgggacctctctaagcccctcactctggcccatgttg
ggactccaactactgctgctgtggctcctcactggcccccgacactcatga
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