Salmo trutta (river trout): 115152889
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Entry
115152889 CDS
T08542
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00514
Other types of O-glycan biosynthesis
stru04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115152889
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115152889
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115152889
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115152889
Glycosyltransferases [BR:
stru01003
]
Glycan extension
O-Glycan
115152889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
115152889
NCBI-ProteinID:
XP_029553658
LinkDB
All DBs
Position
18:17118838..17158321
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AA seq
408 aa
AA seq
DB search
MHVSSMGVSKLCFLFSLALCALLLLIPTLQPSQHQGDLPQPRAHNKPARHPGRLVVPLQA
DMGKVTVGRNGIDGDSMGQSTPRETKRTVDGDWVYTARRADTQGTGKHTDSQTGSEGDFL
HRAGGVTGAGGSRPRNPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKAKEQTFIFTDGE
DQELRRRAGANVINTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMDDDNYVIVPSLL
KLLSSYHHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSP
WASLGNFISTAEKIRLPDDCTMGYIIEALLEVTLTHTHLFHSHLENLQRLPTDTVLEQVT
LSYGGFENRRNVISIGGAFSLVEDPSRFKTVHCLLYPETDWCPSKGHH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagctctgcttcctgttctccctggctctctgt
gctttgttgctcctcatccccaccctccagccctcacagcatcagggggacttgccccag
cccagggcccacaacaagcctgcccggcaccctggacgtctggtggttcctctccaggca
gatatggggaaagtgacagtggggcgtaatgggattgatggtgactctatggggcagagc
acaccaagagagaccaagaggactgtggatggggactgggtgtatacagctcgtcgagct
gacacccagggcactgggaagcatacagactctcagacagggtcagagggggacttcctc
cacagagctgggggtgtgacgggggctggagggtctcggcccaggaaccctctggagctg
aaagacattttcatagcggtgaagaccaccaggaagtaccacaagtccagattggatctg
ctgttccagacctgggtgtccaaagccaaagaacagacctttatattcacagatggggag
gatcaggagctgaggaggagagcaggggctaacgtcatcaacactaactgttcagcagca
cacacacggcaggccctgtgctgtaagatgtctgtggaatacgacaagttcatcgagtcc
cagaggaagtggttctgccatatggatgatgataactatgtgattgtacccagtctgctg
aagctgctgtcctcctaccatcacacgcaggatgtttacctgggcaggcccagcctcgac
caccccatagaggccgcagagagggtcaagagtgacggatctgtgtcagtgaagttctgg
tttgctacaggaggagcagggttctgtatcagtcgtggtctggccctcaagatgagtcca
tgggctagtctggggaacttcatcagcacggcggagaagatccgtctccctgacgactgc
accatgggttacatcatcgaggcgctgctggaggtgacactgacacacacacacctcttc
cactcccacctggagaacctgcagaggcttcccacagacaccgtgctggagcaggtcaca
ttgagctacgggggttttgagaacaggaggaatgtgatcagcattggaggagccttctct
ctggtggaggacccgtcacgatttaagactgtccactgcctcctctacccagagactgac
tggtgtcctagtaaggggcaccattga
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