Salmo trutta (river trout): 115153174
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Entry
115153174 CDS
T08542
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115153174 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115153174 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115153174 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
115153174
NCBI-ProteinID:
XP_029554169
Ensembl:
ENSSTUG00000035188
LinkDB
All DBs
Position
18:30360930..30482097
Genome browser
AA seq
1713 aa
AA seq
DB search
MAWIGWDLLFSIGLFISPAFVSTDQSGFRRYYVLQPGPSGTDRVHVSSISSRSGATGQPH
AYNVELSASYSGQVRTRRMGNQANPIPLRQDTQFTQHQQVIRRTSHNVQQSHQMKMSGVN
VCGGQCCHGWSKASGSQRCTKPNCLPQCQNGGMCLRPQLCVCKPGSKGKACEQNTMPTSS
YPAQPGNGHTNGHSIVPQRPIPQQGYAPAPVPVSNMAQMTLTVKQSPHLIRPQQIQPGIQ
QFVRKPKYYHTQTTHTQTHVQHQPDRPIPLTVGHNPIHVGNHTGRIKVVFTPTICKVTCT
GGRCQNNCELGNTTTIVSENGHAADTLTAPNFRVVVCHLPCMNGGKCSTRDKCQCPPTFT
GKFCQMPVQNGNGQQRQNGQQQTSQIHSTHTLPLTFSNGQNPVKYAPSIVNIHVKHPPEA
SVQIHQVSQLDANGQKVKGNGQNGRSQTQSHYTYHHSESSQKIQQQGHNIIYPNQQSYVP
QYQPVSNSQLGRCFQETTGTQCGKALPGLSKQEECCQSIGTSWGFHKCQKCPKPSIPLTA
GGSRQAMDCPQGYKRINNSHCQDLNECQLQGVCPNGDCLNTMGSYRCSCKAGFIPDPTLS
TCIPDTPAVHEEKGACFRLVSSGKQCLHPVPAQLSKQLCCCSVGKAWGPRCDKCPLPGTA
KFKEICPGGMGYTVTGSYKPKPSNQLPKLPSQPETINKPMITHQEPMAPPLPFPTPEKPV
EALSVTERQLPSIPVATDAPEQELVILEATSSRPVVEVEAGQPQLSPGVSTMRMEPAFPE
VVEKTSPPAPALILPSNAGQDIAPTQSAEVDECQVNPHICGQGICYNTVEGYTCACNQGY
QMDETHTTCVDVDECLESVSLCSNGRCKNTPGSFLCVCQPGFMTDEEGTSCVDLNECLNS
QACPEDGFCINSVGSYICRHCDSGYRMSPTGQCEDIDECLDMGVCPSGMCVNLLGSYECD
PCPEGFQGQGGQCVDVDECLHQSTCANGKCSNFEGYFVCSCNDGFTLSLDGQSCEDVDEC
QDEKVCTRGHCQNTVGSYLCNCGPGFRASPAGDQCDDVDECQELIMPCDSVGQCVNNMGS
YHCSCPQGYQQTNGTSCLDVDECLDDPELCSPHGECLNAEGSFYCVCERGFAASQDTHTC
EDVDECSDDTRCVGGSCENSQGSYRCQCDTGYRLQPDTDTCLDIDECAELGQSICGAWLC
ENTEGSYTCVVDCPPGHDRGPEGICIDIDECKVNATVCGNHGFCENTVGSFRCLCDRGYQ
ESQEGLGCVDVNECDLLSGVCGEALCENVEGSFLCMCPDEDQEYNQMTAKCSPVPTASSV
ERKECYYNLNDENLCENVLTSSVTMEECCCTLGAGWGDNCEVHPCPVQGTDQFSQMCPAG
RGNVPTGDAVFGVTAAESYKDADECALFGQEICKDGFCLNSPGSYECYCKTGLYYDEVKL
QCRDIDECQDESSCVGGECLNTQGSYMCFCTRPMVLDSDNKRCVIAPEVAEQHSVQTDYQ
GICWQTVTGTRKTCTKPLANRKTTFTECCCLFGEAWGMDCALCPLKNTEDYASMCNVPIS
EGQGRPYGRDALVAEPIQEYEVNLDYEPRPDQPGALPLYEDEETPYDAFEGLRAEECGIL
NGCENGRCVRVQEGYTCDCFDGYTLDMSRMACVDVNECSELNNRMSLCKNAKCINTEGSY
KCVCLPGYTPSEQPNYCVAREQEAAAAARTERE
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcggatgggacctattattttctataggtttattcatttcaccggcattt
gtctccacggatcagagtggctttaggagatactacgtgttgcagccaggaccgagcggg
acggacagagtacatgtgagttccatctcttcgcgctccggtgccacgggacagccccat
gcctacaatgtggagctctcggccagttacagtggacaggtccgaacccgtaggatgggt
aaccaagcgaacccgatcccgcttcgccaggacacacagtttacgcagcatcagcaagtc
attcggcgcaccagccacaacgttcaacagagtcaccaaatgaaaatgtcaggggtgaat
gtctgtggagggcagtgctgtcatggatggagtaaggcctctggatcgcagcggtgcaca
aagcccaactgtctgccccagtgccagaatggaggaatgtgtctgaggccccagctctgt
gtctgcaagccgggctccaagggcaaggcatgtgaacagaacaccatgcccacctcctcc
tacccagcgcagccagggaacggtcacaccaatggacacagcatagtgccccagcggccc
attccccagcagggttatgcccctgcgccagtccctgtcagcaacatggcccagatgacc
ctgaccgtcaagcagtccccccacctgatccggccccagcaaatccagcctggtatccag
cagtttgtccggaagcccaagtactaccacacacaaaccacacacacccagacacatgtc
cagcatcagcctgacagacccattcccctgacagtgggacacaaccccatccacgtgggg
aaccacacgggccggatcaaggtggtcttcacacccaccatctgcaaagtgacctgcaca
ggggggcggtgccagaacaactgtgagctgggcaacaccaccaccatcgtcagtgagaac
ggccatgccgcggacaccctcactgcccccaacttcagagtagtggtatgccatcttccc
tgcatgaatggtggaaagtgcagcaccagggacaagtgtcagtgcccgcctaccttcaca
gggaagttctgccagatgcctgttcagaacgggaatgggcagcagcgccagaatggacag
cagcagacgtcccagattcactccactcacactctgcctctcaccttcagcaatggacag
aaccctgtgaaatatgcccccagcatcgtgaacatccacgtgaagcatcctccagaggcc
tcggtgcagatccaccaggtctcccagctagatgccaatgggcagaaggtgaaaggcaat
gggcagaatggccgctcccagacccagtcccactacacctaccaccactcagagagcagc
cagaagatccagcagcagggacacaacatcatctaccccaaccagcagagctacgtcccc
cagtaccagcctgtctccaacagccagctgggacgctgcttccaagagaccactggcaca
cagtgcggcaaggccctccctggtctcagcaagcaagaggaatgctgtcagagcatcgga
acatcctgggggttccacaaatgccagaagtgcccaaaaccatctattcctctgacagca
ggaggatccagacaggcgatggactgcccccagggatacaagcgcatcaataattcccac
tgccaagatcttaatgagtgccagctgcagggcgtgtgtcccaacggagactgtctgaac
accatgggtagttacaggtgcagctgtaaggccggcttcatccctgaccccaccctctcc
acctgtatccctgacacccctgccgtccacgaggagaaaggggcttgtttccgattggtc
agttcggggaagcagtgtttgcacccggtgcctgctcagctgagcaaacagctgtgctgc
tgcagtgtgggcaaggcctggggcccgcgctgcgacaagtgccccctgccaggaacagct
aaattcaaggagatatgccctggtgggatgggctacactgtcacaggctcttacaagccc
aaaccatccaatcaactacccaaacttcccagccaacctgagaccatcaacaagccaatg
atcacccaccaagagcctatggccccgcctctgcccttcccgacacccgagaaaccagtg
gaggccttgagcgtcactgagagacagcttccctctattccagttgccacagatgctcct
gagcaggagctggttattctggaggctactagtagtaggccagtagttgaggtcgaggct
ggccagccacagctctctcccggtgtctctaccatgaggatggagccggccttcccagag
gttgtggagaaaacgtccccccctgctccagccctgatcctcccctccaacgctggccag
gacatcgccccgactcagtcagcagaggtggatgagtgccaggtcaaccctcacatctgt
ggccaggggatctgctacaacactgtggagggttatacctgcgcctgtaaccagggctac
cagatggacgagacacacaccacctgtgtagatgttgatgaatgcctggagtctgtgtca
ctgtgctccaacggccgctgcaagaacacacccggcagcttcctgtgtgtgtgccaacca
ggcttcatgacagatgaggagggaaccagttgcgttgatttaaacgagtgtctgaactcc
caagcttgtcctgaggatggcttttgtatcaacagtgtgggttcctacatctgtcgacac
tgtgacagcggctacaggatgagcccaacaggccagtgtgaagatatagatgagtgtctg
gacatgggtgtgtgtccatccggcatgtgcgtcaacttgctgggctcttatgagtgtgat
ccgtgtccagagggcttccagggccagggaggacagtgtgtcgatgtagatgaatgcctg
caccagtcaacttgtgccaatgggaagtgctccaactttgagggatattttgtctgctcg
tgtaacgatggattcacgctcagcttagatggacaatcatgtgaagatgtggatgagtgc
caggatgagaaggtgtgtaccagggggcactgccagaacactgtgggttcttacctgtgt
aactgtgggcccggcttcagggcctccccggcaggggaccagtgtgacgatgtggatgag
tgccaggagctcatcatgccctgtgacagtgtgggccagtgtgtcaacaacatgggctcc
taccactgcagctgtccccagggctaccagcagaccaacggcaccagctgcttagatgtt
gacgagtgtctggacgacccggagctgtgttccccacacggggagtgtctcaacgctgag
ggctccttctactgcgtctgtgagagaggcttcgctgcaagccaggacacacacacctgt
gaagacgtggatgagtgctcggatgacaccaggtgtgttggcggctcctgtgagaacagc
cagggttcctacagatgccagtgtgacactggctaccgcctgcagccagacactgacaca
tgcctggatatcgatgagtgtgcagagctgggccagagtatctgtggggcgtggctctgt
gagaacacagagggctcctatacgtgtgtggtggactgcccccccggacacgaccgtggc
ccagaaggcatctgtatcgatattgatgagtgcaaggtcaacgccacggtgtgtggtaac
cacggcttctgtgagaacacggtcggttccttccgctgcctgtgtgaccggggctaccag
gagtcccaggagggcctcggctgtgtggatgtgaacgagtgtgatttgctgagcggtgtg
tgtggcgaggccctgtgtgagaacgtggagggctcgttcctgtgtatgtgccccgacgag
gaccaggagtacaaccagatgaccgccaagtgcagtcctgttcccacagcctcgtcagta
gagaggaaggagtgttactacaacctcaatgatgagaacctgtgtgagaacgtgctgacc
agcagtgtcaccatggaggagtgctgctgcacactgggtgcaggctggggggacaactgt
gaggtgcacccctgccctgtccagggtactgatcagttttcccagatgtgtccagctggg
agaggcaatgtccccactggtgacgctgtgtttggagtgaccgcagccgagagttataaa
gatgcagatgagtgtgcgttgtttggccaggagatctgtaaggatggcttctgcctcaac
agcccagggagctacgagtgttattgtaagactggcctgtactacgacgaggtcaagctg
cagtgcagagacattgatgagtgtcaggatgagtctagctgtgtggggggagagtgtttg
aacacacagggctcctacatgtgtttctgtacacgccccatggtgttggactctgacaac
aagcgctgtgtgatcgcccctgaagtggctgagcaacactctgtgcagactgactaccag
ggtatttgctggcagacggtaacgggcacccggaagacttgcaccaagcccctagccaac
agaaagaccaccttcacagagtgctgctgtctgtttggagaggcctggggcatggactgt
gccctttgccccctgaagaacacagaggactatgcctccatgtgtaacgtgccaataagt
gaaggacaggggcgtccgtatggtcgcgacgcccttgtggctgagcccatccaggagtac
gaggtcaacctggactatgaacctcgccccgaccagcctggtgccctgcccctgtacgag
gacgaggagaccccgtacgatgcgtttgagggcctgagagcggaagagtgtggcattctg
aacggctgtgagaacgggcgctgcgtacgggtacaggagggctacacctgcgactgcttc
gacggatacaccctggacatgtcccgcatggcgtgtgtggatgtgaatgaatgttccgag
ctcaacaaccggatgtccctctgcaagaacgctaaatgtatcaacacggaagggtcctac
aagtgtgtgtgcctgccgggatacaccccctctgagcagcctaactactgcgtggccagg
gaacaagaggcagcagcagcagcgcgcacagagagggagtga
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