Salmo trutta (river trout): 115154611
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Entry
115154611 CDS
T08542
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115154611
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115154611
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
DUF7505
Motif
Other DBs
NCBI-GeneID:
115154611
NCBI-ProteinID:
XP_029556905
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All DBs
Position
19:42127202..42133418
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AA seq
865 aa
AA seq
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MEQRTMRIRGHLRWQVLWIHQFVLLWNTIEAQIPYTIPEELKEGSVVGNIAKDLGLGISE
IYDRKLRIASDAGKQYFSVDLGKGELVVNERIDREYLCGENVPCLLPLEVIVENPLQLHR
IEIEIQDINDNSPGFLTNERILKIAEVINPGAKFPLESAHDPDVDANSLRSYSISDNDHF
LLNMKTQGGQKIPELVLKTSLDREKQAVHKLVLTAVDGGTPARSGTSEITVIVLDVNDNE
PQFERPFYEISVAENRPIGNQIVHVKASDSDEGLNGEVEYFFADQTPDSIMTLLNVDSNT
GEITIKGQLDYEQTNLHTFDIVAKDKGSPQMEGHCSVKINIADVNDNAPQIIITSLTSPI
PENSAPGMVIALISAKDLDVGENGKVKLNMSRGSPFTLKPSVSNHYALVTNGPLDRETFP
NYDVVINAVDSGSPPLSTKKTVTVKILDVNDNPPVFSRTSYTVYVKENGTPGSLLSSVSA
SDTDMGENAKISYSILDSTVQDVSVSSYIYINSDNGSIYSMHSFDYEKLKVFQIQVQAKD
HGSPSLSSNVTVHVFILDQNDNAPAVIYPSAVMGSVSHQKMPRSAKAGHLTTKISAVDAD
SGHNAWISYRLVEATDSSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIEIQDNGEPVQSAT
VTVNILLEDGLHEPISDFRQKTAEPSKRNSKITFYLIISLASVSVLSLLTFLILVVKCVR
NSRSSSSCCIRRADSDGYKNPNRNLQLQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPVS
EFSDFTLVKPSSTTDFKDMINVLDASLPDSAWTFESQQVCFYCHRIQLLLIYDCISWNWV
LPLPFIRFYIIWVFCIFCLYQSFKL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaggacaatgaggattcgaggccatttgaggtggcaagtgttatggattcat
caattcgttctcctgtggaatacaatagaggcgcagattccatacactatacctgaagag
ttaaaggaaggttctgttgttggaaatatagccaaggacctgggtttgggaatatctgag
atttatgaccgtaaactgaggatagcttctgatgctggtaagcagtatttcagtgtggat
ttgggaaagggtgagctggttgtcaatgaaaggatagacagagaatatttatgtggagag
aatgtcccttgtctgttaccgctggaggttatagttgaaaatcccttacagctgcaccgc
attgaaatcgaaatacaggatataaatgataattctccaggttttcttacaaatgaacga
attttgaaaatagctgaggtgattaatccaggtgcaaaattcccattggaaagtgcacat
gatcctgacgtagacgcaaactcattacggtcctatagtatcagcgataatgaccatttc
ctgttgaacatgaagacccagggaggccaaaagattcccgaacttgtgctgaagacttca
ctggacagagagaagcaggccgtgcacaagctcgtgctcaccgctgtagacggagggact
cctgcacgatcgggtacttctgaaatcaccgtcatagttcttgatgttaatgataatgag
ccccagtttgagagaccgttttatgaaatatctgtagctgagaatagacccattggcaat
cagattgtacatgtaaaagcttcagattctgacgaaggactaaatggagaggtcgagtat
ttctttgcagaccagaccccagatagtataatgacattacttaatgttgactcaaatact
ggcgaaattactatcaaaggacagcttgattatgaacagacgaatttgcatacgtttgat
attgtggcaaaagataaaggcagtccacagatggaggggcactgtagtgtaaagatcaat
attgctgatgttaatgataacgcccctcaaattattataacctcactgaccagtccaata
ccggagaattcagcccccgggatggttattgcattgattagcgctaaagacttagacgtt
ggtgagaatggcaaagtaaagttaaacatgtcccggggctcaccgttcactctgaagccc
tctgtttccaaccattacgccctggtgaccaacggcccattagaccgagagacgttcccg
aactatgatgttgtcattaacgcggttgattcagggtccccacctttatctacaaagaaa
accgttaccgtgaaaatcctagatgtcaatgacaatcctccagtgttttcccggacctcg
tatactgtttatgtcaaagaaaatggaaccccgggatctttactgagctcagtgtccgcc
tctgatacagacatgggtgagaatgcgaagatctcctattctatattagactctacagta
caagacgtgtctgtctcctcctatatttacatcaactcagataacggcagcatctacagc
atgcactcgtttgactatgagaaactgaaggtgtttcagatacaggtgcaggcaaaggac
cacggctctccgtctctgagcagcaacgtcacggttcatgtttttatcctggaccagaac
gacaatgcccccgctgttatttacccttccgctgtcatgggctctgtctcccatcagaag
atgccccggtccgctaaagcaggccacctgaccactaagatatcggcagtggacgcagac
tcgggccataacgcctggatttcctataggctggtggaggccacagactcgtctctgttc
agtgtgaatctttacacaggggaggtgaggactaaacgcgcggtttcagagcaggatgac
tcctcacagaggctgcttatagagatacaggacaatggggagccggtccagtccgccaca
gtcacagtcaacatactgttagaggacgggctccacgagcccatctcggacttccgccag
aaaacagcagagcccagcaagagaaacagtaaaatcaccttttatttgatcatctctctg
gcctccgtgtccgttttgtctttgttgactttcctcatcttagtggtgaagtgcgttaga
aacagtaggagcagctcgagttgctgtatcagacgggctgattctgacggatacaagaat
ccaaacagaaacctgcagctccagctcaacactgacggccctattaagtatgtggaggtc
ctgggaggggacatgttgtctcagagccagtccttcaggtcgtgtctctctccagtgtcc
gagttcagtgatttcaccctcgttaagcccagcagcaccactgactttaaggacatgata
aacgtgcttgatgcatcattaccggacagcgcgtggacgttcgagagccaacaggtatgt
ttttattgccaccggattcaattgttgttaatttatgactgtatctcatggaactgggtt
ttaccacttccattcattcgattctatataatttgggtgttttgcattttctgtttatat
cagagttttaagctatag
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