Salmo trutta (river trout): 115154873
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Entry
115154873 CDS
T08542
Symbol
trpc5
Name
(RefSeq) short transient receptor potential channel 5 isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115154873 (trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115154873 (trpc5)
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115154873 (trpc5)
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115154873 (trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
115154873
NCBI-ProteinID:
XP_029557405
Ensembl:
ENSSTUG00000036637
LinkDB
All DBs
Position
19:48442713..48474384
Genome browser
AA seq
1039 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPKSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPREEWEMWHPTL
IAEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTHNRLCGRDHPSPDDPRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSS
SEATQQDEANEEEGAGQAQGQSRDQGAKGVSFSTSITERKSKDSGFSVSALFKSMSGAEG
AVDNRPKSNGLRFSSSPPSSAALTRSSGRLQRFSKSKRDSIRRLGLLFSRMNGHVPEARS
PPPRMHQPTYSISDGLLRQPTTWPDIQIPPNPPVTRSLFHLGRNLKELPHAPPQALPLGS
PQQANRSDSLLLLPTGHSLPPPGHSLPPLHCATSITASSSRAVLLGSSEDMFEGWIGPCD
ELDSSEWGAEQEDSITTQL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgctgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtac
ctgacggcggtggagaagggcgactacgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtcaactgcctggacccgctggggcgcagcgcgctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtg
ggcgacgcgctgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctg
tcccatcgcaggtctagcagagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgag
atcatcaagctgctggtccagcgcaaggtgaccatcccccggccacaccagatccgctgc
gactgcgtggcctgcgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgc
ctcaacgtctacaagaccctggccagcccgtccctcatcgccctgtccagcgaagacccc
atcctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaatgag
ttccgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagt
gaggagctagacccacaggactgccgtgacctggccaagctcaaactagctatcaagtac
caccagaaagagtttgtatcccagccaaactgccagcagctcctggccaccctgtggtac
gacggtttccccgggtggcgtagacgccactgggcggtcaagctggtcacctgcttcacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccccaagagcgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgccacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggaggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccactatctcactcaaaatagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctg
atcgccgagggcctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactcccacctggggcctctgcagatctccctgggacgcatgctgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaac
caactgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgcgagaaacagaacaatgccttctctacgctattcgagacgttgcagtccctgttc
tggtcaatattcggcctgctcaacctgtacgtgaccaacgtgaaggcgcgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgtcatctctctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctatcagctcatcgctgaccatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagttattttgacgagggaggaact
ctccctccgcccttcaacatcgtccccagccccaagtcagtgtggtacctgtgtgtgtgg
acgcacaaccgcctgtgtggacgggaccatcccagtcctgacgacccgaggaaacacgag
aacttaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcag
gaggtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaagaca
gacgagggtctgacagaggagaattttaaggagctcaagcaggacatctccagtttccgc
tacgaggtgttggacctgttgggggacaggaagcctccgcggaggacctactcatccagc
agtgaggctacccagcaggacgaggccaacgaggaagaaggggctggacaggcccagggt
cagtccagggaccaaggggccaagggggtatccttcagcacgtcaatcactgagaggaag
agcaaggactctgggttcagcgtctccgccctctttaagtccatgtcaggggcagagggg
gcagtggacaacagaccaaagagcaacgggctcaggttctcctcctcccccccgtcctcc
gctgcgttaacccgcagtagtggccggctgcaacgcttctccaagtccaagagagactcc
atcaggcggctgggcctactcttctcccgcatgaacggacacgtcccagaggccaggtcc
cctcctcccaggatgcaccagcccacctacagcatctcagacggtctgcttcggcagccc
acaacctggccggacatccagatcccccccaatcccccggttacacgcagcctgttccac
ctggggaggaacctgaaggagctaccacatgcccctccccaggccctgccattggggtca
ccccagcaggctaacagaagtgacagtctgctcctgctacccacgggccactccttaccg
ccgccaggccactccctgccacccctgcactgtgctaccagcatcacggcctccagctcc
cgggctgtcctcctgggctctagtgaggacatgtttgagggctggataggaccttgtgac
gagctggactcctctgagtggggggctgagcaggaggactccatcacaacacagctttag
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