Salmo trutta (river trout): 115155383
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Entry
115155383 CDS
T08542
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00900
Terpenoid backbone biosynthesis
stru01100
Metabolic pathways
Module
stru_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115155383 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
stru01006
]
115155383 (ggps1)
Enzymes [BR:
stru01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
115155383 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
115155383 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
115155383 (ggps1)
Prenyltransferases [BR:
stru01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
115155383 (ggps1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GCSF
Motif
Other DBs
NCBI-GeneID:
115155383
NCBI-ProteinID:
XP_029557812
Ensembl:
ENSSTUG00000033555
UniProt:
A0A674BZ80
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All DBs
Position
2:complement(40861697..40897036)
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AA seq
309 aa
AA seq
DB search
MDGDMDSAGPERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHN
ASLLIDDIEDSSTLRRGFPVAHSIYGVPSVINSANYVYFLGLEKVLTLDHPEAVHVFTRQ
LLELHRGQGLDIHWRDTYTCPTESQYRTMVLQKTGGLFGLAVGLMQLFSGWKRDLKPLLD
TLGLFFQIRDDYANLNSAEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRT
ENVDIKRYCVDYLEKVGSFAYTRETLRGLEAEAYRLITDLGGNPELEGLVKHLSKMFREP
ETKAGPKED
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacatggattcagcaggaccggagaggattctgctggaaccctacaagtac
ctgctacagctgccaggaaaacaagtacggactaaactctctcaggcgtttaaccactgg
ctcaatgttcccgaggacaaacttcaggtgatcatagaagtgacagagatgctgcacaac
gccagtctcttgatagatgacattgaggacagttctacactgaggagaggtttccctgta
gcccacagcatctacggcgtcccctctgttatcaactctgccaactacgtctacttcctg
ggactggagaaggtcctaaccctggatcaccccgaggcggtgcatgtgttcaccagacag
ctgttggagctgcaccgcggccagggcctagacatccactggagggacacctacacctgt
cccacagagagccagtaccgtaccatggttctccagaagacggggggtctgtttggcctg
gccgtggggctcatgcagctgttctctggctggaaacgagaccttaagcctctcctggat
acattaggactcttcttccagatcagagacgactacgcaaacctgaactcagcagagtac
agtgagaacaagtccttctgtgaggatctgaccgaggggaaattctccttccccacgatc
cacgccatctggtcccgtccagagagcactcaggtccagaacatcctgagacagcggacg
gagaacgtggacattaagagatactgtgtggactacctggagaaggtgggctccttcgcc
tacaccagagagaccctgagagggctggaggccgaggcataccgccttatcacagatctg
gggggaaaccctgagctggaggggttagtgaaacacctcagtaagatgtttagggagcct
gagacaaaggctggccctaaagaggactga
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