Salmo trutta (river trout): 115156330 Help Entry 115156330         CDS       T08542                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism stru  Salmo trutta (river trout) Pathway stru04115   p53 signaling pathway stru04145   Phagosome stru04148   Efferocytosis stru04350   TGF-beta signaling pathway stru04510   Focal adhesion stru04512   ECM-receptor interaction stru04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:stru00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     115156330   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115156330  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     115156330    04148 Efferocytosis     115156330   09143 Cell growth and death    04115 p53 signaling pathway     115156330   09144 Cellular community - eukaryotes    04510 Focal adhesion     115156330   09142 Cell motility    04820 Cytoskeleton in muscle cells     115156330  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:stru04131]     115156330   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:stru00536]     115156330 Membrane trafficking [BR:stru04131]  Endocytosis   Phagocytosis    Opsonins     115156330 Glycosaminoglycan binding proteins [BR:stru00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115156330 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C TSP1_ADAMTS EGF_3 Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  115156330 NCBI-ProteinID:  XP_029559701 Ensembl:  ENSSTUG00000013788 LinkDB All DBs Position 1:complement(7511429..7529188) Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLLTCESIRVAENRDDNSVYDLFELVQVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVNKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQTILTQETPATARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSVLTDGI VLIEDTINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKLLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLEGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSATCGGGAQTRKRLCNDPAPKYGGKECQGDPKAT QLCNKNTCPIDGCLSNPCFPGTKCTSFPDGTWRCGKCPSAYSGDGIKCNDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPSRYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIADDRDNCPFVYNPRQYDYDRDDIGDRCDNCP YNRNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVKTLWHDPKKIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctgttgatgcttttgacctgcgagagcatacgagtt gcagagaaccgagacgacaatagcgtgtacgacctgttcgagctggtccaagtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgagctccccgagagctccttcagggacctcatcgattcc atccatgccgagaggggcttcctcctcctgcttaacttcaagcagtttaagcggaccagg ggctccctcttgaccgtggagaagcgggacgggtccggagccgtgttcgagatagtctcg aatggaaaagcgaacaccctggatgtggttttctccaccgttaataagcaacaggtggtc tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacggcggaactggacgct cccatccagaccatcctcactcaggagactcccgccacagcgcgcctcaggattgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgtgcgctttgtctttggaacc actttggacgcgattctgcgcaacaagggatgccaaaactctgttctgactgatgggatc gtccttatcgaagacaccatcaatgggtccagccctgccattaggacagactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgcgaggacctggctggcatg ttcaaggaactgaaggggctgggagtggtggtgaaggagctgtccaatgaactgcgcaaa gtgacggatgagaacaagctgttgatgaacagagtggggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgtaccgagtgc acttgtcaaaactctgccaccgtgtgccgtaagatctcctgccccctgatcccttgtgcc aacgccaccgtgcccgatggagagtgctgcccacgctgtggaacaccgagtgactatgcg gaggatggatggtccctgtggtctgaatggacccactgttccgtgtcttgtgggcgggga attcagcagagaggccgctcctgcgaccgcatcaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgcctctgcaactcccccacaccccagctggaaggcaaggactgccaaggagaggga agacagactgagaagtgcaccaagtcaccctgcccaatcaacggtaactggggtccctgg tcgctatgggatacctgctctgccacctgtgggggaggagctcagacacgtaaacgtctc tgcaacgaccccgcccctaaatatggtggtaaggagtgccagggtgaccccaaggccact cagctgtgcaacaagaacacctgtcccatcgatggctgtctgtccaacccttgcttccct gggaccaagtgcaccagcttccctgatggaacatggaggtgtggaaaatgcccctctgct tactctggtgacggcatcaagtgcaatgacattgatgagtgcaaagaggttcctgacgct tgtttcgtgttcaatggagtacaccgctgtgagaacactgaccctggctacaactgcctg ccctgtccctcacgctactctggacctcagcccttcggcaggggagtggaggaagccacc gccaagaaacaggtgtgtacaccacgtaacccctgcctggatgggagccacgactgcaac aagaacgcccgctgtaactacctgggacactttgccgaccccatgtaccgctgtgagtgt aagcctggctatgctggaaacggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactacgacaaggatggtgttggtgacgcttgt gacaacgatgatgataatgatggtattgctgatgacagggataactgcccattcgtgtac aaccccaggcaatatgactatgacagagatgatattggagatcgttgtgataactgtccc tacaacagaaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtggacattgatggagatggtattctgaatgagaaagacaactgtccgtacgtctacaac gtggaccagagagacactgacctggatggtgtgggagacatgtgtgacaactgtccgctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagataagtgtgacagc aaccaggacatcgatgaagacggccaccagaacaacctggacaactgcccctacatcccc aacgctaaccaggccgaccacgacaaagacggaaaaggagatgcctgcgaccacgatgat gacaatgacgggatcccagacgagaaagataactgcagactggccttcaaccctgaccag atcgactccgatggtgatggtcgaggagatgcttgcaaagacgactttgaccaagacaat gtgcctgacatctacgacgtgtgtccggagaactttgacatcagcgagacggacttcagg aagttccagatggttcccctggaccccaagggaacgtcccagatcgaccccaactgggtg gtcagacatcagggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggtaccttcttcatcaacacagagaga gatgatgactacgccggctttgtgtttggctaccagtccagctccaggttctacgtggtg atgtggaagcagatcacacagacctactggaacaacaaacccaccaaagctcagggatac tcaggactgtcaatcaaggtggtcaactccactactggacctggtgagcacctcaggaat gctctctggcacactggtaacaccccaggacaggtgaagactctttggcacgaccctaag aaaattggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatggctgattctgggagcata tatgacaagacgtacgcaggcggaagactaggcctctttgtcttctcacaagaaatggta tacttctcagacctcaagtatgaatgcagagatgcataa

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