Salmo trutta (river trout): 115157152
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Entry
115157152 CDS
T08542
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04217
Necroptosis
stru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115157152
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115157152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115157152
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
115157152
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115157152
NCBI-ProteinID:
XP_029561001
Ensembl:
ENSSTUG00000050631
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All DBs
Position
21:30987561..31003313
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AA seq
472 aa
AA seq
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MALSAGGWAQTPVPATFQSVHGGPALASSNTVLMSVRVSVCHSGIRPLCLPRAGDEVLRL
QLSMDPSKAGEFRLALRDSSGSGRSVFIAEFDLRSVEYEVKSPRLHEIHLATPPHDCIRF
NFCCDQEAEQWATVVMSSLREAHRVAANSSPHPLDDRQKHTAAVALEQRSTASLPLTEEL
CLELARAIEAGNSQAAAQHASALAHQKAALTIQLSEKSYAEGEIRLSVAVEDISTSCCVT
VKVFPHMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQRDGDMAYLYLIS
ARHARLTRQLFQQDQEGALLTPPPPTSNGSTSQDWRGYSTLPSRLSHNSQGSTGRAADRL
GMSEIREALNLETLQINNKPDQPCKASKTQTEWVCPSCTFINNPSRPGCEICSTARPDSG
EHRLIQQVLYVLHRVDRTHPLQSKLQYCLYSLSVLKEKGRRVEQGEIGALIS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagcgcgggcggttgggctcaaacgcctgtgccagccacattccagtctgta
catggtgggcccgcactggctagcagcaacacggttttgatgtcggtgcgagtgtcggtt
tgccattctggaattcgaccgctttgcctccccagagctggcgatgaggttctccgtctt
cagcttagtatggaccccagcaaagctggagagtttcggctagcactgagggacagtagc
ggaagcggccgtagtgtgttcattgcagagtttgacttgcgctctgtggagtatgaggtg
aagtctccacgccttcacgagattcatttggcaacgccccctcacgactgcatccgcttc
aacttctgctgcgatcaggaggctgagcagtgggccacagtggtgatgtcatccctaaga
gaggcacacagagttgctgcaaatagttccccacatcctctggatgaccgacagaagcac
accgcagcagtagctctagaacagcgcagcacagcctccttaccactcactgaggagctg
tgcctggagcttgcccgggcgatcgaagcaggcaacagccaggctgctgctcagcatgcg
tctgctctggctcaccagaaggcagcgctcaccattcaactgtctgagaagagttacgca
gaaggagagatacgtttgtctgtggcagtggaggacatttccacttcctgttgcgtcaca
gtgaaagttttcccacacatgaccgtcgcagcactcaagcagcaggtgtttctggagtat
ggcttccaccctcgcgtgcagcgctgggtgatagggcagtgtttgtgcacagagcccagg
tccctggcctcgtatggggtccagagggatggggacatggcctacctctacctgatctca
gcccgccatgcccgcctcacccgccagctgttccagcaggaccaggagggcgccctcctc
accccacctccgcctaccagcaacgggtctacttcccaggactggaggggctacagcacc
ctgccctccaggctcagccacaactcccaggggagcaccggacgtgcggctgacaggctg
ggtatgagtgagatccgagaggccctcaacttggagactctgcagatcaacaataaacct
gatcaaccctgcaaagccagcaaaacacagacagaatgggtttgtccctcctgcaccttt
atcaacaatccttcccgaccaggctgtgagatctgcagtacagccagacctgactcaggg
gagcaccgcctcatacaacaggtactgtatgtattgcatagagtagacagaacacatccc
ctgcagtctaaactacaatattgtctttattccctgtctgtattaaaggagaaaggaaga
agagtggagcagggggagattggtgcattgatcagttga
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