Salmo trutta (river trout): 115160961
Help
Entry
115160961 CDS
T08542
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115160961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115160961
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
115160961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
115160961
NCBI-ProteinID:
XP_029567431
Ensembl:
ENSSTUG00000032336
UniProt:
A0A674BSD6
LinkDB
All DBs
Position
24:complement(23037166..23143141)
Genome browser
AA seq
1518 aa
AA seq
DB search
METSAPTATEKKEHKGSGLDGSSFSDLPKKPSPTTVTRGPHHLFPTFHTPIPIDMRHHEG
RYHYEPHPLHAMHGHHGLAGSPVISDGISLIRLSPHAAGTGDSPFSPPHSYVHPQMEHYL
RSMHSSPTLSMISAARGLSPAEVTHEHLKEHGLFSLPPPPPGANPTDYYHLMASGRSTYG
DLIMQTGAAAAAAAAAAHLPDYSPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQTM
IRTSPNSLVAYINNSRSSSAASSSYGHLSVSGISPSFTFPHPINPMAYQQLLNQQRGLSA
FGHTPPLIQPSPSFAARQHAHALAASTLNTTHNTSSSESNQNAGGDPAVSSTVNPMITKR
HKVKTEAEGPRPISPCFQEHVLDLSEELDKDECKQEPEAVYETNCHWVGCSKEYDTQDQL
VHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAY
SRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKR
YTDPSSLRKHVKTVHGPEAHVTKKQRGDVPPRGPPKGNGENEANAKQSGRGMDGKMEANS
TIRGAEDCLQVKSIKTENSITYQSSPGGHSSCSSEPSPLGSAHNNDSGVEMALHSGGSFG
DLSALDDPPMVDSSTLSPRNSVGVGLGLHKGGGVTIKLENIKKERLKNVRDSCPWANSGP
QAPQVRNTKLPPIPAVGSLLENSNMIAPPGPYPGQRLGDLSSCEVTMLNQLNEQGRRDSN
TSTASSAYISRRSSGISPCYSSRRSSEASQFSNRHNNISSADSYDPISTDLSRRSSEASQ
CGGGNLSSLLSLTPAQHYHLKAKYAAAIGGAPPTPLPNMERMSLRTRMALYGDHSQERES
LSHCQLFHPPTAAVPRRCSDIGYSSYSMMPHEVPGNLPRRASDPVRRPTLDPLSLPRVQR
YNSMNSMNPNSVMPPPSADRRGLAMQSYTRSDGSLHHHPFAPRPPSISENVVMETMAVDG
LDHAGDEDMVLPDDVIQYLRSQNTGPGQSAGPADYANSQSQGGFQVQGNMTSSQQQFYGQ
RRMAMVDANMPLSGSGQAPLPPYQMSPGSGSQQQQYPASHRLNNKNNMPVQWNEVSSGTV
DATATSRLTKQNLLRNNNLAMVQQRQNFGHFQGRMGSNSNQQVMPMNQNMALQGYTQRSN
SQWINSVQQQQRQPCSMNYPEQMSPQQGYGQEIIPVPNSGSGNGSLRPNFNGMALPNGRV
MATHTNPDTQIYRSRTQVESYVPHMIQVDQQNYSISSQQQDVNTGNRAGMQPRPPMEPKS
MSSRQHSGSRSMMQQNRFPQSDLHHNTNEASPKRPGGTAAHTGGHNRDSNSNASMFYAGQ
IQMFEPNNNHNVSFNSPMSPFMGQTPGGTTVTMASPGVNQVTSTVDSSGSSGSISGVEHA
QIDFDAMLDDGDHSSLMSGTLSPGLLTSLSQNSSRLTTPRNSVTLASVPAGIGNMAIGDM
SSMLTTLAEESKFLNMMS
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgctccgacagccactgagaaaaaggagcataagggatcaggtctggat
ggaagcagcttctcagacctgccaaagaaaccatctcccactactgtgaccagaggtcct
caccatctcttccccacgtttcacacaccgatcccaatcgatatgcgtcaccacgagggg
aggtaccattacgagccacaccccctccacgccatgcatggacatcatggcctagcaggc
agcccggtcatctcagacggcatctctctgatccgtctgtccccccacgcagcagggacg
ggggattcccccttcagcccacctcactcctacgtccacccccagatggagcactacctc
cgttccatgcacagcagccccaccctctccatgatctctgctgcccgtggactcagccct
gcagaagtgacccatgagcacctgaaggagcatggtctgttcagcctgccccctccacct
ccaggtgccaaccctacagattactaccacctcatggccagtggcaggagcacttacgga
gacctcatcatgcagaccggggcggccgcagcagcagcagccgcagcagcacacctgccc
gactacagccctgtggacgtgtcccggttctccagccccagactgacccccaggctgaac
agaaagcgagccctgtccatctcccctctctcagacgccagcatcgacctgcagaccatg
atccgtacctcgcccaactccctcgtggcctacattaacaactcacgctccagctctgca
gccagcagctcctacggacacctgtcagtcagcggcatcagtccgtcgttcacctttccc
caccccatcaaccccatggcctaccagcagctgctcaaccagcagagaggcctgagtgcg
ttcggccatactcctccccttatccagccctcaccctccttcgctgcccgccagcatgcc
cacgccctggcagcctccaccctcaacaccacccacaacacctccagctctgagtccaac
cagaatgctggtggggacccggcggtgagcagcacagtcaaccccatgatcaccaagagg
cacaaggtcaagacagaagcagaaggaccccggcccatatcaccatgctttcaggagcat
gtcctggacctgagtgaggagctggacaaagatgagtgtaagcaggagccagaggctgtc
tacgagaccaactgtcactgggtcggctgcagcaaggagtacgacacccaggaccagctc
gttcatcatatcaacaatgaccacatccatggggagaagaaggaatttgtgtgtcgctgg
gatgagtgctcgcgggaacagaagcccttcaaggctcagtacatgctggtggtccatatg
aggagacacactggagagaagccacacaaatgcacatttgaaggatgctgtaaggcctac
tctcgcctggagaacctgaagacccatctgaggtctcacacaggggagaagccttacgtc
tgtgaacacgagggctgcaacaaagccttctccaacgcctcagacagagccaagcaccag
aacagaactcactccaatgagaaaccctacatctgtaagatccctgggtgcactaagcgc
tacacagaccccagctctctcaggaagcatgtgaagacggttcacggaccagaggcccac
gtcacgaagaaacaacgtggcgatgtgccccccaggggtcctcctaaggggaatggagag
aacgaggcaaacgccaaacagagtggtagagggatggatggaaaaatggaggccaacagc
accattagaggagcagaggactgcctgcaggtcaagtcaatcaagactgagaactcaata
acgtaccaatccagcccgggcggtcactcgtcatgtagcagtgagccgtcgccacttggc
agtgcccacaacaatgacagtggagtagagatggccctgcacagtgggggcagctttggg
gacctgagtgcactggatgaccctcccatggtggactcctccaccctctccccccgcaac
tcggtgggggtgggtcttgggcttcataaagggggaggagtcaccatcaagctggagaac
atcaagaaggagaggctgaagaatgtgagggactcttgtccctgggccaactctggtcct
caggcacctcaggtccgaaacaccaagctgcctcccattcctgctgttggttcccttctg
gaaaactctaatatgatcgctccacccgggccctaccctggtcagcgtcttggtgacctg
tcgtcatgtgaggtgaccatgctgaaccagctaaacgaacagggccgccgggacagcaac
accagcactgccagctcagcctacatcagccggcgctcctctggcatctccccctgctac
tccagccgccgctcctccgaagcctcgcagttcagcaaccgccacaacaacatcagctca
gccgactcctacgaccccatctccacagacctgtcccgtagatccagcgaggccagccag
tgtggaggtggaaacctctctagtttgctcagcctcacccctgcccagcactaccatctc
aaggccaagtacgctgctgcaatagggggagctccacctacacctctgcccaacatggag
cgtatgagcctcaggaccaggatggccctgtacggggaccactcccaagaaagagagagc
ttatcccactgtcagctgttccacccacctaccgcagcagttcccagacgctgcagcgac
atcggctacagtagctatagtatgatgccccacgaggtccctgggaaccttccccggcga
gccagcgaccccgtccgcagacctaccctagacccactgtcccttccacgagtccaacgc
tacaacagcatgaacagtatgaaccccaacagtgtgatgcctcctccctctgccgaccgc
cggggcctggccatgcagagctacacgcgatccgacggaagcctgcaccaccaccccttc
gccccacggccccccagcatctcagagaacgtggtgatggagaccatggccgtggacggg
ctggaccatgcaggagatgaggacatggtgctgcctgatgatgtcatacagtacctcagg
tctcagaacactggccccggccaatcagcaggccccgccgactacgccaacagccaatca
caaggcggctttcaggtccaggggaatatgacctcctcccaacagcagttctatgggcag
aggaggatggcaatggtggatgccaacatgcccctgtctgggtcaggccaggctccccta
cccccctaccagatgagccctgggtctggctcccagcagcagcagtacccagcctctcac
agattgaacaacaagaacaacatgccagtccagtggaacgaggtcagctcagggactgtg
gatgctacagccacctccagactcaccaagcagaacctcctcagaaacaacaacctggcc
atggtccagcagagacagaactttgggcatttccagggtagaatgggtagtaacagtaac
cagcaggtgatgcccatgaaccagaatatggcgctacaaggctacacccagagaagcaac
tcccagtggatcaactctgtccaacagcaacaaaggcagccatgcagcatgaactatcct
gagcagatgagtccccagcaaggatatggccaagagatcatccctgtccccaactctgga
tctgggaatggcagcctacgacccaactttaatggcatggcactgcccaacggcagggtg
atggctacacacaccaatcctgatacgcagatctacaggtcaaggactcaggttgaaagc
tatgtcccccacatgattcaggttgaccagcagaactacagtatttcttctcagcagcaa
gacgtcaatactgggaacagagctggaatgcagcccaggcctcccatggagcccaagtct
atgagcagtagacaacactcagggtccagaagtatgatgcagcagaaccgtttccctcag
tctgacttacatcacaacaccaatgaggccagtccaaagaggccgggtggcaccgcagca
cataccggcggacataacagagactcaaactccaatgcttcaatgttttatgctggccag
atacagatgtttgaacccaataacaaccacaatgtgagcttcaactcccccatgtcgccc
ttcatgggccagactccgggaggcaccactgttaccatggcatctccaggggtcaaccag
gtcaccagcaccgttgactcatccggctcctctggatcgatctctggcgtggagcatgcc
cagatcgactttgacgccatgttggatgatggagaccactccagcctgatgtcagggacc
ctcagccccggactcctcaccagcctgtcccagaattcctcaaggcttaccaccccccgt
aactctgtgaccctggcctctgtgccagcaggaatcggtaatatggccatcggagacatg
agctccatgttgaccaccctggctgaggagagcaagttcctcaacatgatgagctaa
DBGET
integrated database retrieval system