Salmo trutta (river trout): 115161450
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Entry
115161450 CDS
T08542
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115161450
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115161450
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
ATP-synt_B
IQCJ-SCHIP1
GPHH
Motif
Other DBs
NCBI-GeneID:
115161450
NCBI-ProteinID:
XP_029568302
Ensembl:
ENSSTUG00000027071
LinkDB
All DBs
Position
2:complement(67918572..67952455)
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AA seq
1782 aa
AA seq
DB search
MFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQSVKKMVDVM
ILTVFALAVFALIGLQLFMGNLRNKCVRWPILNSTVFDDYNSTSSLDGTMSFGETSNSTI
PFDFKDYISNIENHYYLEGSLDALLCGNSSDAGNCPEGFTCIKAGRNPNYGYTSYDSFGW
AFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQN
EATLKEAQDMEEEFQRLLEQYRIQAQEQADAAAGSQVTLTSRKELSHHSGSYGGSADDEQ
SLGDDVIKDCNGRIVPRLAIVPVSSESESVPEDEFKEDSMLHLEQPGLKNRSASAASVLT
TVMEELEDAQKPCPPGWYKFADTFLKWDCCVPWVWLKKWLLFIVMDPFVDLGITICIVLN
TLFMAMEHYPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWNIFDSIIVT
FSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYKECVCKIATDCELPRWHMHDFFHSFLIVFRILCGEWIETMWDCME
VAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQIAIGRINWG
IDWVKSFVRHMVLQLLGKKATGDKEGGEGIEGNPEKETFALNHLDTCQDSKMADGMTNCV
DGLQADGEMSLNVPIAQGEPDFEDDDDEDDSGSFTSDEENGHGDHIKLFGAVGDESSVCS
TVDYVPEPEPVEEEEEEEPEPEEPEACFTDGCIARWPCLTFDVSQGRGKKWWNLRRTCFT
IVEHDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFIIEMLLKWVA
YGFKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSELGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPITEVNNR
SDCLALQHATQEARWVNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSY
EINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQKKYHEAMKKL
GSKKPVKPIPRPTNMIQGAVFDFITQQFFDIFIMVLICLNMVTMMVETDDQSAEKENVLY
KINLAFIVVFTGECLLKMFALRHYFFTIGWNIFDFVVVILSVAGIMLSDIIEKYFVSPTL
FRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAY
VKKQAGIDDIFNFQTFGSSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIENPGSDVRG
NCGNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDDFVMFDETWEK
FDLEGTQFIEYAKLSEFCDTLQEPLRIAKPNRIKLISMDLPLVTGDKIHCLDILLAVTQE
VLGEGVEMTAMKVSIEAKFNMNNPTTDSYEPITTTLRRKEEEAAAVIIQRAYRKHLLKRS
ILHASFMRRSKRQIRREENEEPPETEGLLVRKMNVLYGSDLDLAAEMELAGLRAQPTSVP
LVSNRPSDLPKQTQTTRPEPGRPLLLVVPVEVTSEVVLRSAPVTSDPPLDLPEQTEPSGS
EPTGLEPTWPEPAGPNLLVVPVEVTPYLCSRESIDNLRESIV
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgattaccattctgtcgaactgcttttttatgacgatgagcgacccaccg
tcatggagtaaaactgttgagtatgtttttactggtatttatacctttgaggcctcatgc
aaagtgttgtcaagaggctttgttgtcggaccttttacattccttcgagatccatggaat
tggctggatttcatggtgatcagcatggcgtacgtcacagagtttgttgatctaggcaac
gtgtcagcccttaggacgttccgtgtactccgagcccttaaaacaatcactgtgattcct
ggattaaaaaccatcgtgggcgccctggtccagtctgtaaagaaaatggtagacgtgatg
atcctcactgtgttcgccctggccgtgtttgcactcatcggcctgcaactcttcatggga
aatttgcgcaacaagtgtgtccgatggcccatcctcaactcaacggtgttcgacgattac
aactccacctcgtcgcttgacggcaccatgagtttcggcgaaacatcaaattccactatt
cctttcgatttcaaggactacatcagcaatatagagaatcactactatttggaaggtagt
ctggatgctcttctctgcggaaacagctctgatgctgggaactgcccagaaggattcacg
tgcataaaggctgggagaaaccccaactacggctacaccagctacgactccttcggctgg
gccttcttgtccctcttcagactcatgacgcaggactactgggagaacctgttccaactg
acacttcgagcagcggggaagacgtacatgatcttctttgtgctggtcatcttcctggga
tccttctacctcatcaacctcatcctggccgtggttgccatggcctacgacgagcagaac
gaggccactctgaaagaggcgcaggatatggaggaggagtttcagaggcttctggagcaa
tacaggatccaagcccaggagcaagctgatgctgctgctggaagtcaggtgaccctgacc
agtcggaaagagcttagtcatcactctgggtcatacgggggctctgcggatgacgagcag
agcctcggagatgatgttatcaaggactgtaatgggagaatcgtgccccgtctggccatc
gtaccagtgtcctccgagtcggagtcggttccagaggacgagttcaaagaggacagcatg
ctccacctggagcagccaggcctgaagaacagatcggcgagtgctgctagtgttctcacc
accgtcatggaggagctggaagacgcccagaagccttgtccgcccggctggtacaagttt
gccgacaccttcctgaagtgggactgttgtgtgccctgggtatggttgaagaagtggttg
ctctttattgtgatggaccccttcgtggacctaggcatcaccatctgcatcgtgctcaac
acactcttcatggccatggagcactaccccatgagcccagagtttgaccacatgctctcc
gtggggaacctggttttcactgggatcttcacagcagagatggtcttcaagctttgcgcc
atggatccctactactacttccaggtcggctggaacattttcgacagtatcattgtcacg
ttcagtctggtggagttaggtctagccaatgtccaaggcctgtccgttctcaggtctttc
cgtttgctgcgtgtcttcaaactagccaagtcgtggcccacgctcaacatgctgatcaag
attattggcaactctgtgggcgctctgggcaacctgaccttggtgctggccatcatcgtc
ttcatcttcgccgtggtgggcatgcagctcttcggcaagagctacaaggaatgcgtgtgt
aagattgccaccgactgtgagttgccgcgttggcacatgcacgacttcttccactcattc
ctcatcgtgtttcgcatcctgtgcggggagtggatcgagaccatgtgggactgtatggag
gtggccggagccgggatgtgcctggtggtcttcatgatggtcatggtcatcggaaacctg
gtggtgctgaatctcttcctggccttgctgctcagctcattcagtggagacaacctgtcc
agtgatgatgacggtgagatgaacaacctccagattgccatcggcaggatcaactggggc
atcgactgggtaaaatcctttgtccgccacatggtcctgcagctactgggcaaaaaggcc
accggggacaaggaagggggtgaggggatcgaaggaaaccccgaaaaggagacctttgca
ctaaaccacttagacacgtgccaggattccaaaatggccgacggaatgaccaactgtgtg
gacgggcttcaggcagacggcgagatgagcctcaatgtgcccattgcccagggggagccg
gactttgaggacgatgatgatgaggatgacagtgggtcttttacatcagatgaagaaaat
ggacatggtgatcacataaagttgtttggtgcagtgggtgacgagtcctcggtgtgcagc
acggtggactatgtacctgaaccagagcctgtggaagaggaggaagaggaggagccagag
ccagaggaaccagaagcttgcttcactgatggctgtatcgcgcgatggccgtgtctgaca
tttgacgtctctcagggcagaggcaagaagtggtggaacctccgcaggacctgtttcacc
atcgtggaacacgactactttgagaccttcatagtcttcatgatcctcctaagcagtgga
gctctggcttttgaggatatttacattgagaggcgaagaactatcaaaatcatcctggag
tatgcagacaaagtcttcacctatgtctttatcattgagatgctcttaaaatgggtggcg
tacggcttcaagacctacttcaccaacgcttggtgttggctggacttcctaattgtggat
gtttccttagtcactttaggagctaactggatgggctactctgaacttggaccaatcaag
tctcttagaacactcagggctctaaggccacttcgagccctgtcaagatttgagggaatg
agggtggtggtaaacgctcttgtcggcgccatcccctccatcttcaacgtgctgctggtg
tgcctcatcttctggctcatcttcagcatcatgggggtcaacctgtttgccggaaagttc
taccgctgcatcaacaccaccacggaggagctgttccccatcaccgaggtcaacaacagg
agcgactgccttgccctgcagcacgccacccaggaagcccgctgggtcaacgtcaaagtc
aactacgacaacgtgggcttgggctacctctctctgctgcaagtggccacatttaaaggc
tggatggacatcatgtatgctgcagtggactctcgagaagtggaggagcagccctcatat
gagatcaacctctacatgtacatctactttgtcatcttcatcatcttcggctccttcttc
accctcaatcttttcattggtgttattattgacaatttcaaccagcaaaagaaaaagttt
ggtgacgacatctttatgacagaggagcagaagaaatatcatgaagccatgaagaaactt
ggctcaaagaagccagtgaagcctatcccaaggcctacgaacatgattcaaggcgctgtg
tttgacttcatcactcagcagttctttgacatcttcatcatggtcctcatctgcctcaac
atggtcaccatgatggtggagacggacgaccaaagcgcggagaaggaaaacgtcctttac
aagatcaacctggccttcatcgtcgttttcaccggcgagtgtctgctcaagatgtttgcc
cttcgccattacttcttcaccatcggatggaatatttttgattttgtcgtggtcatcctg
tccgtcgcgggtataatgctgtcggacatcatagagaagtactttgtgtcacccaccttg
ttcagggtcatcaggctggctaggataggcagggtcctgcgtctcatcaaaggtgccaag
ggcattcggacgctgttatttgcgttgatgatgtcactccctgccctgttcaacatcggc
ctcctgctcttcctcatcatgttcatcttctccatattcggcatgtccaactttgcctat
gtcaaaaaacaggcgggcatcgacgacatcttcaatttccagacgttcggcagcagtatt
atctgcctgtttgagatcaccacctctgcgggttgggatggtcttctgctgccaattcta
aacagcggtcctccagactgcgacccagacattgagaacccgggctcggacgttcggggc
aactgcggcaacccaggcatgggtatcatgttcttctgcagctacatcatcatgtccttc
ctggtggtggtcaacatgtacatcgccatcatcctggagaacttcaacacggcccaagag
gagagcggggacctgctgtgcgaggatgactttgtgatgttcgacgagacctgggagaag
ttcgaccttgagggcacgcagttcatcgaatacgccaagctgtcagagttttgtgacacc
ctgcaggaacccctgcgtatcgccaagcccaaccggatcaagctgatctcgatggacctg
cccctggtcacgggcgataagattcactgcctggacatcctgctggccgtcacccaggag
gtgctgggcgaaggggtggagatgacggccatgaaggtgagcatcgaggccaagttcaac
atgaacaaccccacgacagactcctacgagcccatcaccaccacgctgcggcgcaaggag
gaggaggcagcagccgtgatcatccagcgggcttaccgcaagcacctgctcaagcgctcc
atcctgcatgcctccttcatgcgccgctccaagaggcagataaggcgagaggagaacgag
gagcccccggagacggagggacttctggtgcgaaagatgaacgtgctctatgggagcgac
ctggaccttgccgcagagatggaattggctgggttgcgagcacaacccacatcggtccct
ctggtgtccaatcggccatcggacctccccaagcaaacacagaccaccaggccggagcct
ggcagaccactcctcttggtggtccccgttgaggtcaccagtgaggtggtgttacgctca
gcccctgtgacgtctgatccgccattggacctccccgagcaaacagaaccatcagggtcg
gagcccacagggctggaacctacctggccggagcctgctgggccaaacctcttggtggtc
cccgtagaggtcaccccctatttgtgtagccgtgagtcaatagacaacctgcgagagtcg
attgtataa
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