Salmo trutta (river trout): 115162009
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Entry
115162009 CDS
T08542
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115162009
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115162009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
115162009
NCBI-ProteinID:
XP_029568769
Ensembl:
ENSSTUG00000009829
LinkDB
All DBs
Position
25:10882649..10930757
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AA seq
1798 aa
AA seq
DB search
MKKSRGHKSDHGKGGGGDEAAILETEDLDFMGGMGGGGGPDPDTISLASVTAVTTNVSNK
RSKPDIKMEPSAGRPVDYQVSVTIVEARQLVGLNMDPVVCVEIGDDKKYTQMKESTNCPY
YNEYFVFDFHVPSDVMFDKILKLSVIHSKNLLRSGTLVGSFKLDIGTVYSQPEHQFFHKW
ALLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKATETDEDDIEGNLLLPEGVPAERQW
ARYYVKIYRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQILFAGQRGKTSIQKSSYEP
IWNEQIVFTEMFPPLCKRMKVQIRDSDKVNDVALGTHFIDLRKIANDGDKGFLPTLGPAW
VNMYGSTRSYTIMDEHQDLNEGLGEGVSFRARLLVSLCVEILDTSSPEVMSSTEVKVEGV
PKISESATGKVEEFFLFGAFLEATMIDRKIGDKPICFEVTIGNYGSEIDGVTKLKSSSGK
KSGGDGDEEETELIHGSSDEEEGDDDNDLVSVSTTPPMKPVITDRNYFHLPYFERKPCIY
IKSWWQDQRRRLYNANLIDNIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEDLSNGCSQ
FLTLANKDQNQTGRTKLDKERLKSCMRELENLGQQAKTIRTQVKKNTVRDKIKLVQNFLH
KLRFLADEPQHSIPDIYIWMMSNNKRIAYARVPSKDILYSGVDEETGKDCGKVKTIFLKL
PGKKGFGAAGWTVQAKTEIYLWLGLNRQRKDFLSGLPNGFEENRMLKGPGSQSAPPISLT
YMMKQIFQLRVHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLMVF
DNVELFGEVGELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPITKMADEHYGPPRFPPQL
EYYQIYRGNCTAGEMLAAFELLQIGPHGKADLPPIDGPSDMDRGPILPVPLGIRPVLSKY
RIEVLFWGLRDLKRVNLAAVDRPRVDIECAGKGVQSSLIQNYKKNPNFGTLVKMFEVDLP
ENELLHPPLNIRVVDCRAFGRYTLVGNHAVTTLRKFIYRAADKQANNWNTQEEIIVNYEP
EPSIKKMETMVKLDSGSDAVVKIEEDDKGGKKKKRKKGGDEVEEEEFDESMLDWWSKYFA
SIETLMEILKAQEAAMADAEEKEDQDISAEGGEIKPDDSPVKGKKGKGKDKRRPGDMPEK
KKHKLNELQVYPKELEKEFDNFEDWLHTFNLFRGKAGDDDDQNMADEDRIIGKFKGSLCM
YKVPVSDEMQREMGFDSNMGMFQNIPTNDPINVVVRVYIIRATDLHPADINGKADPYIAI
KLGKSDIKDKENYLSKQLNPIFGKSFDIEATFPMDSTLTVSVYDWDLVGTDDLIGETKLD
LENRYYSKHRAICGLPSKYAVHGYNVWRDPLKPTQILAKLCKEGKLDGPHYGPGGRVKVA
NRIFMGPTEIEDENGLKKQTDEHLALTALKHWEDIPRVGCKLIPEHVETRPLLNPDKPGI
EQGRIEMWVDMFPKDMPAPGPAIDIAPRKPKKFELRVIIWNTDEVILEDDDIFTGEKSSD
IFVRGWLKGQQEDKQDTDVHYHSLTGEGLFNWRFIYPFDYLQAEEKIVISKKESMFAWDE
TEYKIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSINMVLNEQDIPMVS
IFKQRRIKGWWPFLARDENDEFELTGKVEAELQLMTAEEAEKNPVGEGRNEPEPLEKPNR
PDTAFLWFLMPFKAIKNLICNQYFWLTIKLVVALLLVLILGLFIYSMPGYMVKKLMGA
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcacgtggccataagtcagaccacgggaaaggaggagggggcgatgaggca
gccatcttggagacagaggacctggacttcatgggagggatgggagggggagggggtcct
gaccctgacaccatctccctggcctcagtcacagccgtcaccactaacgtctccaacaag
agatcaaaaccagacattaagatggaacctagtgccgggagaccagtggattaccaagtt
agtgttaccatcgtagaggccagacagctagtagggctgaacatggacccagtggtctgt
gtggagatcggagacgataagaagtacactcagatgaaggagtcgacaaactgcccatat
tacaatgagtattttgtctttgacttccacgtcccatcagatgttatgtttgacaagatc
ctgaagctgtcggtcatccactccaagaacctgctgcgtagtggcacgctggttggctcc
ttcaaactggacataggcaccgtctactcacagccagaacaccagtttttccacaaatgg
gcccttctctctgaccctgatgacatcactgccgggtgcaaaggttacattaaatgtgac
atcgccgttgtggggaaaggagacaacatcaagactccccacaaggccacagaaaccgat
gaagatgacatagaaggtaacctgctgttacctgagggggttcccgcggagcgccagtgg
gctcgctactatgtgaagatctatcgagccgagggccttcccaagatgaacaccagcatc
atggctaatgtcaagaaggcttttataggggagaacaaggaccttgtggacccttatgta
caaatactgttcgctggccagagggggaaaacatctatccagaagagcagctacgagccc
atctggaacgagcagatcgtcttcactgagatgtttccaccgctctgcaaacgcatgaag
gtccagatccgcgactcagacaaagtgaacgacgtggccctcggaacacacttcattgac
ctgagaaagatcgccaatgatggagacaaaggcttccttcccaccctgggtccggcctgg
gtaaacatgtatggctccacgcggagctacaccatcatggacgagcaccaggacctgaac
gagggtctgggggagggggtgtctttcagggcccgtctgctggtcagcctgtgtgtggag
atcctggacacctcctctccggaggttatgagctctacagaggtcaaggtggagggggtg
cccaaaatctcagagagcgccacagggaaagtggaggagttcttcctcttcggggcgttc
ctggaggccaccatgattgacaggaagatcggggacaaaccaatctgcttcgaggttaca
ataggtaactatgggagtgagattgatggtgtgaccaaactcaagtcgagtagcgggaag
aagagtgggggagacggagatgaagaggagacagagctgatccatggatctagtgatgaa
gaggagggagatgatgacaatgacctggtctcagtgtccaccaccccgcccatgaaacca
gtcatcaccgacagaaactatttccacctgccttactttgagaggaagccgtgtatttac
atcaagagctggtggcaggaccagagaagaagactgtacaatgccaaccttatagacaac
attgccgataaactggaggagggtctgaacgatgttcaggaggtcattaagacagagaag
gcatatcctgaacgcagactgagaggggtcttggaggatctcagcaatggatgcagtcaa
tttctgactctggctaacaaggaccaaaaccagactgggaggaccaagctggacaaagag
agactcaagtcctgcatgagggaactggagaacttaggtcagcaggctaagaccatcagg
acacaggtgaagaagaacacagtgagggataagatcaagctggtgcagaactttctccac
aagctcaggttcctagctgatgagccgcagcacagtatccctgacatctacatctggatg
atgagtaataacaagcgaatcgcttacgcccgtgtcccctccaaagacatcctgtactcc
ggggtggacgaggagactgggaaggactgtggcaaagtcaaaaccatcttccttaagctg
cctggtaagaagggctttggggcagctggctggacagtgcaggctaagacagagatctac
ctgtggctgggtctgaaccgtcagaggaaagacttcctgtctggtctgcccaacggcttt
gaggagaacaggatgctgaaaggacctggctcacagtctgctccccccatcagcctcaca
tacatgatgaagcagatcttccagctgagggtccatatgtaccaggctcgcagcctgttt
gcagcagacagcagcggcctctctgacccctttgccagggtcttcttctccacacacagc
caggtcacagaggtgttgaatgagacactgtgtcccacctgggaccagctgatggtgttc
gacaatgtagaactgttcggagaggtcggcgaactcagggacgaccctcctataatcgtc
atagaaatctatgaccaggacacggtgggcaaagcagagttcatgggcaggactttcgcc
aagcccataaccaagatggctgatgaacactacggacctccacgtttccctccccaactc
gagtactaccagatctatagggggaactgcaccgctggagagatgctggcagccttcgaa
ctgctgcagattggtcctcatggtaaagctgacctgccgcccatcgacggtccttcagac
atggaccgtggtcccatcctacctgtccctctgggcatcagaccagtcctcagcaagtac
aggatcgaggtgctgttctgggggctcagggacctgaagagggtcaacctagccgcggtg
gacaggcctcgtgtggacatagaatgtgccggtaaaggggtccagtcttccctgatccag
aactacaagaaaaatcccaactttggcaccctggttaagatgtttgaggtggatctgcct
gagaacgagctgctccaccctcccctgaacatcagagtggtggactgcagagcgttcggt
cgctacaccttagtggggaaccatgctgtcaccacactacgcaagttcatctaccgggca
gcagacaagcaagccaacaactggaacactcaggaggagatcattgtcaactacgagcca
gaaccctccatcaagaagatggagaccatggttaagctggactctgggtctgatgcggtg
gttaaaattgaggaggatgataagggagggaagaagaagaagagaaagaagggaggagac
gaggtggaggaggaagagtttgatgagagcatgttggattggtggtcaaagtacttcgcc
tcgatcgaaactctgatggagattctcaaggctcaggaggcagctatggcagatgccgag
gagaaagaggaccaagatatttctgctgagggtggagagatcaaacctgatgactctcct
gtcaaaggaaagaaaggaaaaggaaaggacaagaggaggcctggagacatgccagagaag
aagaagcacaaactcaatgagctgcaggtgtaccccaaggagttggagaaggagtttgat
aactttgaagactggcttcacaccttcaacctgttcagagggaaggccggagacgacgac
gaccagaacatggcggacgaggacaggattattggcaaattcaaaggttctctgtgcatg
tacaaagtgccagtgtcagatgagatgcagagggagatgggcttcgactccaacatgggc
atgttccagaacattccaaccaacgacccaatcaacgttgtagtccgggtctatatcatc
agagcaactgatctgcatccagcggatatcaatggaaaagctgatccatacatcgctatc
aaactaggaaaatcagacatcaaagataaagagaactacctctccaagcaactcaaccct
atctttggcaaatcttttgacatcgaagccacatttcccatggactctacactaacagtg
tccgtctatgactgggacttagtgggcactgacgacctgattggggagactaaactggat
ctggagaaccgttactacagcaagcacagagccatatgtggcctcccatccaaatatgcc
gtccatggctacaatgtgtggcgggaccccctgaagccaacccagatcctggccaagctg
tgtaaagagggcaagctggacgggccccactatggcccgggaggacgggtcaaggtggcc
aacaggatctttatgggcccaaccgagatcgaagatgaaaatggtctgaagaagcagaca
gatgagcacctggccctgacggcgctgaagcactgggaggatatccccagggtgggctgt
aaactcatcccagaacatgtggagaccaggccactcctcaaccctgacaagcctggcatc
gaacaggggaggattgagatgtgggtggacatgttccccaaggatatgcctgcacctgga
ccagccattgatatcgcacccagaaaaccaaagaagtttgaactgagggtgatcatctgg
aacacagacgaggtcattctagaggatgatgacatcttcactggagaaaagtccagtgat
atcttcgtgcggggctggctgaagggtcagcaggaggacaagcaggacacagacgtccac
taccattccctgacaggggagggtctcttcaattggcgcttcatctacccctttgactac
ctacaggctgaggagaagattgtcatttctaagaaggagtctatgtttgcctgggacgag
actgagtataagatccctgctcgtctcaacctacaagtctgggatgctgatcacttctct
gcagatgactttttaggcgccattgagctggatctgaaccgttttcctcgtggagcgaag
acagccaagcagtgctccatcaacatggtgctgaacgaacaggatattcccatggtgtcc
atcttcaaacagaggagaatcaagggctggtggcccttcctggccagagatgagaatgac
gagtttgaactcactgggaaagtggaagcagagctgcagctgatgactgcagaggaggct
gagaagaacccagtaggtgaaggacgcaacgaacctgaacccctggagaaacccaaccgt
ccagacacagccttcctgtggttcctcatgcctttcaaggccatcaaaaacctcatctgc
aaccagtacttctggctcacgatcaagttagttgtggccctgctgctggtgctcatcctg
ggcctcttcatatacagcatgcctggatacatggtcaagaagctaatgggggcttga
DBGET
integrated database retrieval system
