Salmo trutta (river trout): 115162102
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Entry
115162102 CDS
T08542
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115162102
04621 NOD-like receptor signaling pathway
115162102
04622 RIG-I-like receptor signaling pathway
115162102
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115162102
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
DUF4201
Sina_ZnF
zf-RING_UBOX
FapA
CALCOCO1
BLOC1_2
DUF1664
V_ATPase_I
zf-RING_6
AAA_13
Snapin_Pallidin
Exonuc_VII_L
GAS
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
115162102
NCBI-ProteinID:
XP_029568928
Ensembl:
ENSSTUG00000008970
LinkDB
All DBs
Position
25:complement(17982100..18004162)
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AA seq
576 aa
AA seq
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MSAGRNADVRELQIPLQHRSPSQAALSLAQSPWPSDPKTGFLPQHGGFWDHFIATPEPKY
CCEACRLVLCNPRQTECGHRFCETCISEQLSKPNPVCPADMEPLFKDKIFRDVCCHREIM
ALRVYCRSEKNGCKEQMSLHQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMHKMAMTELQKHKETVCPLFPVACPNHCTFPSILRSELTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKMEDVKGELLERYKVLPGLS
SRLSETESQYEEMRENNRQLEQKLTAMQNLMSSHSEKLLEMELELRSLRTIREEVETLRG
TVESIRSRVATLEGGRGGAIPATHTLGSLETQLSRQDDMLSVHEIRLADMDLRFQVLETA
SFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLS
LFFVVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIAS
GCPLFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgtgcgggagctgcagatccccctccagcatcgctct
ccctcccaggctgctctctctctggcccagagcccctggcccagcgaccccaagacaggc
ttcttaccccagcacgggggcttctgggaccacttcatagccaccccagagcccaaatac
tgctgtgaggcctgcaggctagtgctctgcaaccccaggcagacagagtgtggacaccgc
ttctgtgaaacctgcatctctgagcagctaagcaaaccaaatccagtatgtccagcagat
atggagccgctgttcaaagacaagatcttccgtgatgtgtgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgagaagaacggctgtaaggagcagatgagtctacat
caggtcatggatcatttgaatgtgtgtccgtattttgaggtgccatgtcctttaggaaag
tgcaaagagaagatgatgcgcaaagacattcctgagcacttgagttggaaatgtaaacac
agagagaccacctgtgaattctgcatgcacaagatggccatgactgaattacagaaacac
aaagaaaccgtttgtcctttatttccggtggcctgccccaatcattgtacttttccctcc
atcttacggagcgagctgacaagtcatcaacatgagtgccccaaggctcatgttacctgc
tcctttattcgctttggatgcaatttcaagggtctcaaccaagacatgagggatcatgaa
tctagctttgcctctgaacacctgcggctgatggcaaccaggaacactacgctggaggcc
aagatggaggatgttaaaggagagcttctggagcggtacaaggttctgccaggcctaagc
agccgtctgtctgaaacagagtctcagtacgaggagatgagggagaataacagacagctg
gagcagaagctcactgccatgcagaacttgatgagttcccactctgagaagcttttagag
atggagctggagctgaggtctctgaggaccatccgagaggaggtggaaacactacgaggc
accgtggagagcattcgttcaagggttgcaacgctagagggaggaaggggcggagccatc
ccagccacacacacactaggttctttagagacacagctctcccgtcaggacgacatgctg
agtgtccacgagatccgcttggccgacatggacctgcgcttccaggtcctagagacggcc
tccttcaatgggacgctcatctggaagatccgtgactacaagcggcggaaacaagaagcc
gtggcgtcaaagaccctgtctctctacagccagcctttctacactggctactttggctac
aagatgtgtgcccgggtctacctgaacggagacggcatggggaaaggaacccacctgtct
ctgttctttgtggtgatgcgtggcgagtacgatgccctgttgctctggccctttaagcag
aaggtgactctgatgctgatggaccagggcccagccaggaagcacctaggggatgccttc
aaaccagaccccaacagcagcagcttcagacgacccacggcagagatgaacatagcctcg
ggctgcccgctgttcgtggcacagactgtgttggagaacggtacttacatcaaggatgat
accatcttcattaaggtcacagtggacacatctgacctccctgacccttga
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integrated database retrieval system
