Salmo trutta (river trout): 115163807
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Entry
115163807 CDS
T08542
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115163807
09142 Cell motility
04810 Regulation of actin cytoskeleton
115163807
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Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115163807
NCBI-ProteinID:
XP_029571849
LinkDB
All DBs
Position
26:42518048..42699363
Genome browser
AA seq
1732 aa
AA seq
DB search
MGNVESQNGDQAFYGTQHGYLSRKHMSRSLRISKHQSSSGSTRCAHDRHDRHDRHATQGK
AEHRNSQTSTRSSSTPSIPQSLADHALEPFNQTNVLSDFSPIWVDRMAMNLRPVSFHTHL
DNPSVGPHLDNPSVGPHLDNPSVGPHLDNPSVGPHLDNPSVGPHLDNPSVGPHLDNPSVG
PQLDAATPGTRPQCPKDRGLGLYNNTGEGTYLQKTRDGPREPQEPREGVSFKKKRSKSAD
MWREHSLEFSLSDLSQEHLTSTEEIIDTEEADDRDFPDCEGLLGLVSPEGLEGVDAAGRA
NSLDQLYGGQKTPTRRPVARYAKWHHDANRDAREGEDDKMLSPSEEDGNSYGAYTLPCRR
SHCLSEGLTNHQTASCNTMQGRRAQTIQDVTAGEGSEYEDSGIDGVTAEGVEHQSRRYKT
MSMSFSVCSAAGRSLFAGSDSGSSSGGAPSEGIQGVYENFRQELEMSSCQTESLEEAGSA
LSDEQSVMSSAYQSDPLLSVAQGTVRKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVCL
KGCTLFFYETDGRSGIDHNSAPKHAVWAENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQT
CSQTELENWITAIHSACAAAVARQHHREDTVRLLRAEIKKLEQKIDMDEKMKKMGDMQLS
AVTDAKKRKTILDQIFLWEQNLEQFHMGLFRFRCYLASLQGGELPNPKRLLAVASRPTKL
AMGRLGIFSVSSFHALVAARTESGVRRRTQAMSRSSSSKRKSRFSSLWGLDTTSKKKTHP
TINQVFADGEEPVKKPLDGIYDVDTARERVKSHEGTAKSLPQVNSDSHMTDSDIWVPDHL
TPSWVCLPNDQPVLAIIQPGESALDVLETICKAHRLDPAKHYLRLKFLIENQLQFYIPKP
EDDVCDLLYKEIELGSKITKVIQFDRDESCMIGYGFSISVVEEDSVQQLYITDVKAGGLA
FAKGLNAGDEILQLNGKDSCRLKFRDMKEAFSQASLSLTVNTLPSTDRRQTCYLPPRRSD
AQEDLHTDIFSMNQEEILDDGVGLMLESSGDSLDDDSESFSEADQCRKRSKHSSESIYDM
LHLSTEQVAAFCRSLHDMNPSECATSSSSPSLESPFPPPATGTATATRQLSDADKLRKVI
CELVETERTYVKDLHCLIGRYLTPLQKETCLTQDELDILIGNLPEMVEFQVEFLKTLEDG
TRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKAKTDADF
KAFLEERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLNVAMTAMN
KVASHINEMQKIHEEFGLVFDQLIAEQSGDKKEVADLSMGDLLLHTSVAWINPPSSLGKW
KKEPQLAAFIFKTAVVFVCKDGSKQKKKMGGSHRASSVSSEDKDPFRFRHMISTDTLQVR
ALNNQEEEGSAACEIVHVKSESEGRPERIFHLCCSSVDSKKDFLKTVHSILRDKQRRQLM
KTESLPPNQQYVPFGGKRLCALKGARPAMNRAVSDPARTLGRRKLVRNRFTIDTDIVFDG
EPDQDSPLSPLSPEEPEGQGQKEGQGRGEVQAGDTDRWVEEQFDLERYEEEQEAQQETQV
KGGGDVKETDILSDDDDFCQSVGGPSTEPPSTTDLEGPVGALSLGEECKEVGPKHLQPQG
ATGTTTPGMRLSHLGKQCPLVGVSVDDQGSRGETKDIWVRREDCPPDSSELD
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtggagagccagaacggcgaccaggccttctatggtacccaacatggctac
ctgtcccgcaaacacatgtctcgttccctccgcatctccaagcaccagtccagctccggt
tccacccgctgcgcccacgaccgccacgaccgccacgaccgccacgccactcagggcaaa
gcagaacaccgtaattctcagacctccacgcgttccagcagcacccctagtatcccacag
tccttagcggatcacgccctggagcccttcaaccagaccaatgtcctgtcagacttctcc
cctatttgggtggaccgcatggccatgaacctccggcccgtctccttccatacccacctg
gacaacccctctgtagggccccacctggacaacccatctgtagggccccacctggacaac
ccatctgtagggccccatctggacaatccatctgtagggccccatctggacaatccatct
gtagggccccatctggacaatccatctgtagggccccacctggacaacccctctgtagga
ccccagttagatgcagcaacaccagggactagaccccagtgccccaaggacagaggtcta
ggcctgtacaataacactggggaggggacctacctccaaaagaccagagacggaccccgg
gaaccccaggaaccccgggagggagttagcttcaagaagaagaggtccaagtcagctgac
atgtggagagaacacagcctggagttcagtctgtcagacctcagccaggaacacctcacc
agcacagaggagatcatcgacacagaggaggcagacgacagggacttccctgattgtgaa
ggcctgctggggcttgtgtccccagagggtctggagggtgtggacgctgctggcagggct
aactccctggatcagctgtatggaggtcagaagaccccaactcgccggcccgtggcacgc
tatgctaagtggcaccatgacgctaaccgcgacgcccgggagggagaggacgataagatg
ctgtctccgtcggaggaggatgggaactcgtacggagcgtatactctgccctgtcgacgc
tcacactgcctgtctgagggactgaccaatcaccagactgcgtcctgtaacaccatgcag
ggccgcagagcacagaccatacaggatgtgacagccggagagggcagtgagtacgaggac
agtggaatcgacggggtgacggcggagggggtggagcatcagtcccggcgctataagacc
atgtctatgtccttctccgtgtgctcggcggcggggcggagcctgttcgctggcagtgac
agcggaagcagcagcgggggagcgcccagtgaggggatccagggggtctatgagaacttc
agacaggagttggagatgagctcgtgtcagacagagagtctggaggaggcggggtcagcc
ctgagtgacgagcagagcgtcatgagctcagcctaccaatcagatcccctgctcagcgtt
gcccagggaaccgtgaggaaggcgggccgtctggctgtcaagaacttcctggttcacaag
aagaacaagaaggtggagtcagccaccaggaggaagtggaaaagctactgggtctgcctc
aaaggatgcactctgttcttctacgagacagacgggcggtcggggatcgaccacaacagt
gctcctaaacatgcggtgtgggctgagaacagtatcgtccaggccgtacctgaacacccc
aagaaggactttgtcttctgcctcagcaactctttaggggacgcttttctcttccagacc
tgcagccagacggagctggagaactggatcacggccatccactcggcgtgcgcggcggcg
gttgccaggcagcatcaccgggaggacacggtgcgtctgttgagggcggagattaagaag
ctggagcagaagatcgacatggacgagaagatgaagaagatgggagacatgcagctcagt
gccgtgaccgacgccaagaagaggaagaccatactggaccagatctttctgtgggagcag
aatttagaacagttccacatgggtctgttccggttccgctgttacctggccagtctgcag
ggaggggagctgcccaaccccaaacgtctgctagccgtcgcctccagacccaccaagctg
gccatgggacgcctcggaatcttctctgtgtcgtcctttcatgcattggtggcagcccgt
acagagagcggggtgaggagacgtacccaggccatgtctcgttcctcctcgtccaaacgt
aagagcaggttctcctctctgtggggcctggacactacttccaagaagaagacccacccc
accatcaaccaggtgtttgctgatggggaggagccagtgaaaaagcctctggacgggatc
tatgatgtggacactgccagggagagagtgaagagtcacgaggggacagcgaagagcctt
cctcaggtcaactcagacagtcacatgacagacagtgatatctgggtgcctgaccacctg
accccgtcctgggtgtgtctacctaacgaccagcctgtcctcgccatcatccagcctgga
gagtctgctctggacgttctggagaccatctgcaaggcccaccggctggatcctgccaaa
cattacctccgtctcaagttcctcatcgaaaaccaactccagttctacatccctaaaccg
gaggacgatgtgtgtgacttgagtacggagcaggtcgcagcgttctgtcgcagtctccat
gacatgaatccgtctgaatgtgccacaagttcgtcctcccccagcctggagtcgcccttc
cctccgcccgccaccggcaccgccaccgccacccgtcagctctccgacgccgacaagcta
cgcaaagtcatctgtgagctggtggagaccgaacgcacctatgttaaagatcttcattgt
ctcatcgggaggtatttaaccccactacagaaggagacctgcctcactcaggatgagctg
gacattctgattgggaacctgcctgagatggtcgagttccaggtggaattcctgaagact
ctagaagacgggaccagattggttccagacctggagaagctggagagagtggaccagttc
aagaaaatcctcttctctctaggaggttccttcctgtactatgcagaccgctttaagatc
tacagtgcgttctgcgccagccacaccaaagtccccaaggtgctcgtgaaagctaagacc
gatgcagacttcaaggcctttctggaagagaggaaccctaaacagcaacactcctcaacc
ctggagtcctacctgatcaaacccatccagagagtcctgaagtatccactactactgaga
gagctgtactcactgactgaccctgatagtgaagaacactatcacctgaatgtcgctatg
acagccatgaacaaggtggccagtcacatcaatgagatgcagaagatccacgaggagttt
gggttggtgtttgaccagctcatagcggagcagagtggagacaagaaagaggttgctgat
ctgtcgatgggtgacttgctgctccacaccagcgtagcctggatcaaccctccctcctcc
ctgggcaaatggaagaaagagccccaactggctgcattcatcttcaaaacagccgtggtg
tttgtgtgtaaggatggctccaagcagaagaagaaaatgggtggctcccatcgagcatcg
tccgtctcgtctgaagacaaggacccattccgctttcgtcacatgatctccacagacacc
ctccaagtccgagccctcaataaccaagaagaagagggctctgccgcgtgtgagatcgtc
cacgtcaagtccgagtcagaaggacggccggagaggatattccacctgtgctgcagttct
gtggacagtaagaaggacttcttgaagacagtccactccatcctgagagataaacaacgg
cgtcagctgatgaagactgagtctctaccccccaaccagcagtatgtccccttcggaggc
aaacgcctctgtgccctgaaaggagccagacctgccatgaacagagcagtgtcagacccg
gcgaggaccctgggccggaggaaactggtgaggaaccgtttcaccatcgacacagacatc
gtcttcgacggcgagccggaccaggactcccctctgtccccactgtcccctgaagagcct
gagggacagggacaaaaggaaggacagggacggggggaggtgcaggcaggggatacagac
cgctgggtggaggagcagtttgacctggagcgctacgaggaggagcaggaggcgcagcag
gagacgcaggtgaaaggaggaggagacgttaaagagacagacatccttagtgacgatgac
gatttctgccagtctgtcggaggaccctccactgaacctccatccaccacagacctagag
gggcctgtaggggccctgtccttgggagaagaatgcaaagaggtgggccctaaacacctc
cagccccagggagccacggggaccactaccccagggatgaggctctcccacctggggaag
cagtgtcctctggttggggtgagcgtggatgaccaggggtctaggggggagactaaggac
atctgggtacgcagggaggactgtcctccggactcatcagagctagactag
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