Salmo trutta (river trout): 115163862
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Entry
115163862 CDS
T08542
Symbol
trpc6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115163862 (trpc6)
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115163862 (trpc6)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
DUF16
Motif
Other DBs
NCBI-GeneID:
115163862
NCBI-ProteinID:
XP_029571933
Ensembl:
ENSSTUG00000005815
LinkDB
All DBs
Position
26:46714958..46760444
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AA seq
828 aa
AA seq
DB search
MLRQTLAKTRRLGMRGPAYMFSACSASLSLTEERFLDAAEYGNIPGVRKMLEELPELNVN
CVDYMGQNALQLAVANEHLEVTELLLNKDNLARIGDALLLAISKGYVRIVEAILSHRAFA
DTQRLVNSPGQADTRDDFFSYDEDGTRFSHDITPIILASHCHEYEVVHILLRKDARIERP
HDYLCKCGTCSYHQKHDSFSHSRSRINAYKGLASPAYMSLSSKDPVMAALELSNELAVLA
NIEKEFKKDYKELSVQCEDFVVGLLDLCRNTEEVEAILNGDVDASENYEPHGRPSFIRLK
LAIKYDLKKFIAHPNCQQQLMSIWYENLSGLRQQTNVVKFLVVLGVAVGLPVLALLYWVA
PTSKLGKIMRGPFLKFVAHAASFTIFLGLLVMNAADRFQGTKLLPNMTVQDHPSQLFRMK
TTPFTWMEILIISWVIGMVWAECKEIWSQGAREYLSETWNLLDFGMLSLFVTSFVTRFMA
FWHAYAAQSYVNKHYTDLSNITLVPEMEYYRLARNNWVPSDPQIISEGLYSIAVVLSFSR
IAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMFGMFNLYSYYLGAKQNDAFT
TIEESFKTLFWAIFGLSEVKSVKINNGHKFIENIGYILYGVYNVIMVIVLLNMLIAMINN
SFQEIEDDADVEWKFARAKLWFSYFEEGGTLPVPFNLVPSPKSIIALVLGLRDLILKALN
RHKRCHNEDTELNKLDHHKNSAVGGLACPSRHQKIMKRLIKRYVIKAQINKDSDEVNEGE
LKEIKHDICSLRYELLEQKNQNMEELAELIRRLGEKIPAEQQRHQGQI
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgctacgacagacgctggccaagacacggaggctgggcatgcgggggccggcctacatg
ttcagcgcctgctcagccagcctatccctgaccgaggagcgcttcctggacgcggcggag
tacggcaatatccccggggtccgcaagatgctggaggaacttcctgaactcaacgtcaac
tgtgtggactacatgggccagaatgcattacagctggcggtggccaatgagcatctagag
gttacggagctgttactgaataaggataatttggccaggataggagatgctctactgttg
gctatcagtaaaggatacgtcaggatagtggaggccatactgagtcacagggccttcgca
gacacacagaggctcgtcaacagtcctggccaagcagacacacgagacgacttcttctcc
tatgacgaggatggtacacggttctctcatgacatcacccccatcatcctggcctctcac
tgccatgagtacgaggtagtacacatcctcctgaggaaggacgctcgtatcgagaggcca
cacgactacctctgtaagtgtggcacctgcagctaccaccagaagcatgactcgttcagc
cactctcggtcccgtatcaacgcctataaagggctggccagcccggcctacatgtctctc
tcgagcaaagaccctgtgatggctgccctggagctgagcaacgagctggctgtcctggct
aacatcgagaaggagtttaagaaagattacaaggaactgtccgtgcaatgtgaagacttt
gtggtcggactgctggacctgtgccgtaacacggaggaggtggaggccatcttgaatggg
gacgttgatgccagtgaaaactatgagccacatggaagaccaagctttataagactaaag
ctcgcaataaaatatgacctgaagaagttcatcgcccatccaaactgtcagcagcagctc
atgtctatctggtacgagaacctgtctggactgagacagcagaccaacgttgtcaagttt
ctggtagttctgggtgtagctgttggacttcctgtcctggctctgctctactgggtggca
ccgactagcaagctggggaagataatgcgtggtcccttcctgaagttcgtggcccatgca
gcttccttcaccatcttcctgggcctgctggtgatgaatgcagcggatcgcttccagggc
accaagctgctccctaacatgaccgtacaggaccacccctctcagctgttcaggatgaag
accacccccttcacctggatggagatactcatcatatcctgggtcataggaatggtctgg
gctgagtgtaaagagatttggtcccagggggctcgggaatatctttcggagacatggaat
cttctagactttggaatgctgagccttttcgtgacatccttcgttactagatttatggcg
ttctggcatgcatatgcagcacagagctacgtcaacaagcactatactgacctgtctaac
attaccctggtcccagagatggagtactacagactagcccgtaataactgggttccctcg
gacccccagattatctcagagggtctgtattccatcgctgtggtactgagcttctctcgc
atcgcctacatcctcccagctaatgagagtttcgggcccctgcagatatctctgggacgc
acggtgaaagatatcttcaagttcatggtgatcttcatcatggtttttgtggccttcatg
tttggaatgttcaatctctactcatactacctgggagccaagcagaacgacgccttcacc
acgattgaggaaagcttcaagacgttattctgggccatatttggcctgtccgaagtcaag
tcagtgaagatcaacaatggccataagtttatcgagaatataggctatatcctttatggg
gtttataacgtcatcatggtgatcgtcctgctcaacatgctcattgccatgatcaataac
tccttccaggaaatagaggatgacgctgatgtggagtggaaatttgcccgggctaagcta
tggttctcctactttgaggaaggtgggacattacctgtcccctttaacctggttcccagt
cccaagtccatcattgccctggtcctggggctaagagacctcattctgaaggctctcaac
agacacaagcgctgtcacaatgaagatacagagctcaataagttggatcatcataagaat
tcagctgttggaggtctggcttgtccaagtcggcaccagaagataatgaaacgcctcatc
aagagatatgtgataaaagcccagatcaataaagacagtgacgaagtgaatgaaggagag
ctcaaggagattaaacatgacatctgtagtttacgctacgaactcctggagcagaagaac
cagaatatggaggagttggctgagctgatccggagactgggagagaagatacctgcagag
cagcagaggcatcagggtcagatatag
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