KEGG   Salmo trutta (river trout): 115164249
Entry
115164249         CDS       T08542                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru04010  MAPK signaling pathway
stru04137  Mitophagy - animal
stru04141  Protein processing in endoplasmic reticulum
stru04210  Apoptosis
stru04217  Necroptosis
stru04621  NOD-like receptor signaling pathway
stru04622  RIG-I-like receptor signaling pathway
stru04920  Adipocytokine signaling pathway
stru05132  Salmonella infection
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115164249
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115164249
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    115164249
  09143 Cell growth and death
   04210 Apoptosis
    115164249
   04217 Necroptosis
    115164249
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    115164249
   04622 RIG-I-like receptor signaling pathway
    115164249
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    115164249
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115164249
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115164249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115164249
   04121 Ubiquitin system [BR:stru04121]
    115164249
Enzymes [BR:stru01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115164249
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     115164249
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    115164249
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd MATH_2 zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-RING_6 zf-RING_5 ATG16 Zn_ribbon_ACC EFL1
Other DBs
NCBI-GeneID: 115164249
NCBI-ProteinID: XP_029572396
Ensembl: ENSSTUG00000011600
LinkDB
Position
27:complement(8640966..8655132)
AA seq 587 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALSAVCPNEGCPWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHRALRELELKLGQLTLGGGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVYSWYLSCMINVTLMLLDQNNREHIIDAFRPDISSS
SFQRPVSDMNIASGCPLFCPLPKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccagggttccct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgtaattcttgtttgaaaata
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtg
gaagcattgtcagctgtttgtccaaatgaaggatgcccttggacgggcaatatcaaagaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctctgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagaggact
ctaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcacgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcacgtc
gttggctgtgatatgtctgtggagaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccgggccttg
agagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccccgccctggccacctccttcaccccc
ctgcccagcgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaaggtg
gcagagctcagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgcgtcctcaaccgagagatggagcgctcctccaccaccatcgaggcctacaaccgc
cagcatcgcctggaccaggacaaggtggagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctccgatttcacaaagaaaaga
caggacgctgttgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggccagt
cacttgtctttgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtctattcttggtatttgtcttgcatgataaatgtgaccctgatgctg
ctggatcagaataaccgagagcacatcatcgatgccttccgtcccgacatctcctcctcc
tccttccagaggcccgtcagtgacatgaacatcgccagcggctgcccactcttctgccct
cttcccaaactggacaccaaaaactcctacatacgagatgatactatattcatcaaggca
atagttgacctcactggcctctag

DBGET integrated database retrieval system