KEGG   Salmo trutta (river trout): 115164627
Entry
115164627         CDS       T08542                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115164627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115164627
   04121 Ubiquitin system [BR:stru04121]
    115164627
   03036 Chromosome and associated proteins [BR:stru03036]
    115164627
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     115164627
Transcription factors [BR:stru03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    115164627
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115164627
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115164627
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115164627
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box PHD Viral_cys_rich
Other DBs
NCBI-GeneID: 115164627
NCBI-ProteinID: XP_029573168
Ensembl: ENSSTUG00000039421
UniProt: A0A674D1S6
LinkDB
Position
27:23419763..23441844
AA seq 780 aa
MALSLSADEEDYDSESEQKREANRPKPKMGTSAAVKLPSNRSASGARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCGEAGKEDTLEEEDKF
NVMLMECSICNEIVHPNCLKVKDASGVVNDELPNCWECPKCNYAGKTGKVCKQKRGPGFK
YASNLPGSLLKEQKAVKEEGESTSTSTAKRKPEGDDISRHRPEEREPLYRHPPVLTPSTL
PRPRPEDKLRKKRKLFDDDEEEDFSVRKKGKADESLFPKLLHQIKTEEEDQEEEVDKEDT
DSLFWRGLERRDRLGDTEDWAEDGDGKDTKTNFPRPPLKTPVLDSDQSHCSSPQAGPSSE
GGSEPQEKGPRPKVRRKRRLPNKELSKALNQEIQKTEDCLANENRQPLKVEPESENEEPK
RGFRIGSDLGGERPHLRTKEMNGTPWELRHFYPSQITPLGFNRSSPGTRPLPPRSPPKCV
QMERHVIRPPPISPPPDRLPLVDGKTHAVQREVWMKLFGHFTHKELCVCMRVCKTWNRWC
CDKRLWTNIDLNRCKSITPLMLSGIIRRQPLSLDLSWTNISKKQLSWLINRLPGLRVLLL
SGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNIL
DLRLAGLDITDASLRLIIRHMSLLSRLDLSYCNHINDHSVNLLTAAGTTTRDSLTEINLS
VCNRVTDHSLTFFKRCGSICHIDLRYCKQVTKTACEQFIAEMSVSVQFGLKEDKLLQKLS
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggccttgtcactgagtgcagacgaagaggattatgattcagaatctgaacagaaacgg
gaagccaaccggccaaagcccaagatggggacttcagcagcggtcaagctgccgtccaat
cgcagtgcgtctggcgccagacgcaggagaacacgctgccgaaagtgtgaggcgtgcctc
cgaactgagtgtggagaatgtcacttctgtaaagacatgaagaagtttggaggacccggg
cgcatgaagcagtcctgtatcatgaggcagtgcattgcacctgtcctgccccacacagct
gtgtgtgtggtgtgcggagaagcagggaaggaggacacattggaggaggaggacaagttc
aacgtcatgctcatggagtgctccatctgcaatgagattgtccaccccaactgcttaaag
gtaaaagatgcctctggcgtggtgaacgatgaacttcctaactgttgggaatgtcccaaa
tgcaactacgctgggaaaaccggaaaagtctgcaagcaaaaaaggggaccggggttcaag
tatgcgtctaacctccctggctccctgctgaaggagcagaaggcagtgaaggaggagggt
gagtccacatctacgtctacagccaagaggaagcctgagggggatgatatctccagacac
agacctgaggaacgggagcccctctacagacacccccctgtcctgacccccagcaccctg
cctcggcccagacctgaggacaaactgaggaagaagaggaagctcttcgacgatgacgag
gaagaggacttcagtgtgaggaagaagggaaaggcagatgaatctctgttccccaaactc
cttcatcagatcaagactgaggaggaagaccaggaggaggaagtggataaggaggataca
gactctcttttctggcgaggcctggagaggagagatcgtttaggagacaccgaggactgg
gcagaggacggggatggcaaagacacaaagacaaactttccaaggcctcctctcaaaact
cctgttctagacagtgaccagtctcactgcagctctccacaggctggccccagcagcgag
ggtggcagtgaaccccaggagaagggcccacgccccaaagtgcgccgcaaacgccgttta
cccaataaggagctgagcaaagcactgaaccaggagatccaaaagactgaggactgccta
gccaatgagaaccgccagcccctcaaggtggagccagagagtgagaatgaggagcccaag
aggggcttccgcatcggcagtgacctgggaggggagcgcccccacctccggaccaaggaa
atgaacggcaccccctgggagctgcgccacttctaccccagccagatcacccctctgggc
ttcaacaggagctcccctggcacccggcccctgcccccacgctccccacccaagtgtgtc
caaatggagcgccacgtaatccggccaccccccatcagccccccgccagacagactgccc
ctggtggacgggaagactcatgcggtgcagcgagaggtctggatgaagctctttggacac
ttcacacacaaggagctgtgtgtctgcatgcgtgtctgcaagacatggaatagatggtgc
tgtgataaaagactgtggaccaacatcgatctgaaccgctgtaaatctatcactcccctc
atgctgagtggcatcatccgcagacagcccctctcactggacctcagctggaccaacatc
tccaagaagcagctgagctggctaataaaccgcttaccaggtctgcgcgtgttgctgctc
tcagggtgctcgtgggtggctgtgtctgccctctgcacctctagctgccctctgctgcgc
accctggatgtgcagtgggtggaagggctcaaagatgcccagatgagggacctgctctcg
cccccgaccgataacagaccaggtcagttggacaaccgctgtaaactgaggaacatcctg
gacttgcgtctggccggactggacatcacagatgcctctctgcgtctgattatcagacat
atgtcgttactttcccgactggacctgagctactgcaaccacatcaacgaccattcggtc
aacctgctgacggccgcagggaccacaaccagagattccctcacagagatcaacctgtca
gtttgtaatagggtgacagaccattcccttaccttcttcaagcgctgtggaagcatctgt
cacattgacctgcgctattgcaaacaggtgaccaagacggcctgtgaacagttcatagca
gagatgtctgtgagtgtacagtttggactcaaagaggacaaattactgcagaaactcagc
tag

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