Salmo trutta (river trout): 115167550
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Entry
115167550 CDS
T08542
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03320
PPAR signaling pathway
stru04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115167550
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115167550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115167550
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115167550
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115167550
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
115167550
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
115167550
NCBI-ProteinID:
XP_029577961
Ensembl:
ENSSTUG00000011589
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All DBs
Position
29:complement(37278364..37302318)
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AA seq
467 aa
AA seq
DB search
MSTLSATDITDVGPGEVFDGAPELQLDCLCSGDDRSSAEMKHEGNLLPLEPPDHAGFSSP
PQKGPSSLAEKSSPLPMEPSDIKADPADSMPANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHELVERLQQPYVDALRSYIMIKRPND
HLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgcgactgatatcacagatgttggtcctggtgaggtgtttgacggg
gccccagagctgcagctggactgcctctgcagtggtgacgaccgcagcagtgcagaaatg
aagcatgagggcaacctcctccccctggaaccacccgaccatgcagggttttccagcccc
ccccagaaagggccttcctcactagctgagaagagcagcccactgcccatggagcccagc
gacatcaaggccgaccccgccgacagcatgcctgccaacacagagggccagccggtgaag
aggaagaagggtccagcccccaagatgctggggaacgaggtgtgcagcgtgtgcggggac
aaggcctcaggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttccgc
cgcagcgtcatcaagagtgcccagtattcgtgcaaaaacaacggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgtgaagcaggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaaaaagatgaagaagaacgaa
gaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccggaggtggtcccg
ctggcgcccgagcagttggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggacccccag
aacagggaggtgcggcagcagcgctttgcccacttcactgagctggccatcatgtcggtc
caggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagaggac
cagattgccctgctaaagacctcaaccattgagatcatgctgctggagacatcgcggaga
tacaaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaagaggat
tttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttctccaagggg
atgaacgacctgcacctggacgaggcggagtatgctttgctcatcgccattaacatcttc
tctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaactggtggagcga
ctgcagcagccgtatgtggacgcacttcgttcttacatcatgataaagagaccaaacgat
cacctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctcagcagcgtc
cactctgagcaggtcttcgccctgcgcctccaggacaagaagctcccgccgctgctatct
gaaatctgggacgtccacgagtga
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