Salmo trutta (river trout): 115168034
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Entry
115168034 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04210
Apoptosis
stru04217
Necroptosis
stru04510
Focal adhesion
stru04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115168034
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115168034
04217 Necroptosis
115168034
09144 Cellular community - eukaryotes
04510 Focal adhesion
115168034
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115168034
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115168034
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115168034
03029 Mitochondrial biogenesis [BR:
stru03029
]
115168034
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115168034
Peptidases and inhibitors [BR:
stru01002
]
Peptidase inhibitors
Family I32: IAP family
115168034
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115168034
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115168034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
115168034
NCBI-ProteinID:
XP_029578745
Ensembl:
ENSSTUG00000000451
UniProt:
A0A673VX75
LinkDB
All DBs
Position
3:complement(10513216..10520417)
Genome browser
AA seq
464 aa
AA seq
DB search
MSGPGRDSDMESDHAIDWSMMDMRLDSFRGSLLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDAPVERHVEVSPTCKFLSCTHRSRVNSLQGAMMTNETSYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGEGDQVQCFC
CGRMLKGWEAGDTAWGEHSKHYPYCFFILGHDVGNLPSQGGREVETRPRPGPQVPMQSFE
ERLGSFAGIQHPIDHERLARAGFYNTGTPDHVGCFRCGGGLKGWQQDEDPWEEHAKHYPG
CSFLLAEKGQEFVSSVQLQGSGWNNAASSHLNGCSSHETEVLQSANAQKAVEMGLEPALV
ERTIQERICRDGTGYSTLETLLQDCFNRDPDSDAGTAENHDEDPLEKLRKLQREKQCKVC
MDRDICIVFIPCGHLVVCKECSQALDKCPICCRAITQKIKTYIS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacagtgatatggagtcggaccatgcaatagactggtccatg
atggacatgcggctggactcgttccggggttccctcctggcccagcaggtgtcagcggag
aggctggcccgcgctgggttctacttcacgggacaggccgacaaggtgcgctgcttcagc
tgccacaagactgtagagaactggtgtggaggtgacgcacccgtggagaggcacgtggag
gtctcccccacctgtaagttcctgagctgcacccatcgatccagggttaactctcttcaa
ggtgccatgatgaccaatgaaacctcctacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaagtggtagacgataccacctaccccatggccccgcacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccgacctaga
gagctggcccaggcggggctcttctatctgggggagggagaccaggtgcagtgcttctgc
tgtggaaggatgctgaaaggctgggaggccggggacactgcgtggggagagcactccaaa
cactacccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagggg
gggagggaggtggagaccaggccacgcccgggtcctcaggtacccatgcagagctttgag
gagaggctaggcagctttgcgggtatccagcaccctattgaccacgagaggctggccaga
gcaggcttctacaacacaggtacaccagaccatgtgggctgtttccgctgtggtggaggt
ctgaagggctggcagcaggacgaggatccctgggaggagcacgccaaacactatcctggg
tgcagttttctactggcagagaaaggacaggagtttgtcagcagcgttcagctacaaggt
tcaggctggaacaatgctgcttcaagtcacctaaatggatgttcaagtcatgagacagag
gtgctgcagtcagccaatgcccagaaggcggtggagatgggtctggagcctgccttggta
gagaggactatacaggagaggatatgcagggatgggacaggctactccaccctggaaact
ctgctgcaggactgctttaacagagaccctgacagcgacgcagggacagcagagaaccat
gacgaggatccccttgagaagctacggaagctgcagagggagaaacagtgcaaagtgtgt
atggacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtctgcaaggag
tgttcccaggcccttgacaagtgtcccatctgctgtagagccattacacagaagatcaag
acctacatctcctaa
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