Salmo trutta (river trout): 115168069
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Entry
115168069 CDS
T08542
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04260
Cardiac muscle contraction
stru04261
Adrenergic signaling in cardiomyocytes
stru04270
Vascular smooth muscle contraction
stru04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115168069
04020 Calcium signaling pathway
115168069
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
115168069
09153 Circulatory system
04260 Cardiac muscle contraction
115168069
04261 Adrenergic signaling in cardiomyocytes
115168069
04270 Vascular smooth muscle contraction
115168069
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115168069
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115168069
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115168069
NCBI-ProteinID:
XP_029578814
LinkDB
All DBs
Position
30:complement(14861900..14892342)
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AA seq
2134 aa
AA seq
DB search
MAGKEDGVSLAGSVAGDKSDTLGSAASGKKRGGGQKKQIQANKSALRAPRALCCLTLSNP
IRMAALALVEWKPFDIFILLAIFANCVALGVSKPFPEEDSNSTNHNLEQVEYVFLVIFTI
ETFTKILAYGLVMHPSAYIRSGWNLLDFVIVVVGLFSVVAEGTADHKPGEAHHAAGKPGG
LDVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGLLVMFVIIIYAIIGLELF
LGRMHKTCFYLGTELNVDDDPTPCAFAGNGRDCVGNGTECRGPWEGPNGGITNFDNIFFA
MLTVFQCITMEGWTDVLYWMNDAIGFEIPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKER
EKAVARGELQDAQNKKQMEEDMCGYMDWLIEAEDVDEEGNKRAAVAKKKMMKKFGWYKHS
EDGESDSDSEFEAYLDDDNGCCASLMAKMMANSFCEQLCQLNHAFRKNCRVAVKSQNFYW
LVLLLVFLNTAASASEHYGQPKWLTEMQERANKILLMLFTLEMLLKMYSFGFQIHFMALF
NRFDCFVVCGGILETVLVELQIIPPIGISVLRCVRLLRVFKVTRHWAALSNLVNSLLNSM
KAICSLLLLLFLFLIIFSLLGMQLFGGKFNFDETQMKRSTFDTFPQALLTCFQILTGEDW
NAVMYDGIMAYGGPVFPQMIVCVYFVSLFVVGNYILLNVFLAIAVDNLAGGDGGKKQVEE
KKDDEEDWDEDEDKEEDAANEMDDWEENEELRAIEGLEGIMPVKPESAPKEKIEPIPDGS
SFFILGKRNCLRVACHNLIHHSYFTNLILVFIIASSISLAAEDPIRAHSFRNNMLGYADY
AFTSIFTVEIILKVTVFGAFLHPGSFCRNAFNLLDLLVVSVSLASFFLHSSAISVVKIFR
VLKVLRPLRAINRAKGLKNVVQCVFVAIKTIGNILIVTTLLQFMFACIGVQLFKGRFYSC
TDEAKHTPYECMGTFVVYKDGDMNHPMVRERKWQNSEFNFDNVLQGMLALFTVSTFEGWP
QLLYKAIDANAANHGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGESEFK
NCELNKNQRQCVQYALKAKPIKIYIPRNPSQLKFWKIIASSQFEYIMFVLILLNTLTLAV
QHYQQSKTFNSVMDILNLIFTALFTIEMIIKLLALRTHQYFIDAWNSFDALIVVGSVLDI
VVSELSGGDEDVEAIEAAAQAAAVAVPGAPPGAKKESGKVSITFFRLFRVLRLVKLLSKG
EGIRTLLWTFVKSLQALPYVGLLIAMIFFIYAVIGMQTFGKIAIDDNSHINRNNNFQTFF
MSVLLLFRCATGEQWQEIMLAALPGRPCDPESDFEPGDDNMCGSNLAYIYFISFFMLCAF
LIINLFIAVIMDNFEYLTRDWTVLGTHHLDEFKRVWSDYDPEATGRIKHIDVVTMLRRIQ
PPLGFGKLCPHRVACKRLVAMNVPLHSDGTVTFNATLFALVRTSLKIKTEGPVDQDNEEL
RAIIKKIWKRTKPKLLEEVIPPPRGEEVTCGKFYASFLIQDYFKKFRKRKERERKKKGKD
KKDSLQAGLRSLQALAPELHLALAMEGEDEEGVEGELDEEFFKNDNVFEDPGTSATSTPS
TTHMPADIEEGTTTIFMEPFIEPTISSNVVTEQPLTVSEKPESALSSFDVVMEQPTRSEA
IPPPEDTPAPAPPQPAPAASPPKDPSPPQPAPAANPPNAPSQPQPAPVASSPNVASPPQV
VAQSPPQIVLAPPEPEAPQIVLEAAPAPPQPEPLMEGRGGETSTPQQVYYPQYPVDRPTN
NGHVYQEQPVASPIPSDYMQSPTPNFTNGRAAGVPYANGNGMNGNVYNGGTNGGSVNGGS
ITGSSMSGYTGNGYNGNGYNGNGYNGNGNAFEQYVRRRVLPPTPAGRKPPSFNIQCLRAQ
HSADDIPIPGTYESNSPPCRSRLPLDSRRSSASSMSSASWANNGGGHAGSTPGAGVSAAS
AKRGRLLYAPLMLVDEGRGTKQVWGDRTQATSSLPAIATRPSGWYPGAPTLPVPTPQNRS
YTNGRVPSQISQSLIEKGSADSLVESILISEGLGLYARDPKFVNFAKREIADACNMTIDE
MENAATDLLTRSAGQPIGRFEEELADEMNCVISY
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaagaggatggcgtctccttggccggctcggttgccggggacaagtccgac
accctcggctctgctgcctcgggcaagaagaggggtggtggacagaagaagcagatacaa
gccaacaaatctgctctccgagcccctcgagcactctgctgcctcaccctcagtaacccc
atccgcatggctgccttagcccttgttgaatggaaaccttttgatatcttcattctactt
gctatatttgccaactgtgtggccctgggtgtatctaaacccttccctgaggaggactcc
aattccaccaaccacaacctggaacaagtagagtatgtcttcctggtcatcttcaccatt
gaaaccttcactaagatcctggcctatggcttggtcatgcaccctagcgcctacatccgc
agtggctggaatttgcttgattttgtcatcgttgtcgtcgggttgttcagtgtggttgct
gaggggacggccgaccacaagcctggagaggcccaccacgcagcaggcaaaccaggagga
ctggatgtcaaagctctcagagccttcagggtgctacgaccccttaggctggtgtctggc
gtacccagtctccagattgtcttgaactccatcatgaaggccatggttcccctactccac
attggtctgctggtcatgtttgtcatcatcatctatgccatcatcggcctggagctcttc
ctcggcaggatgcacaagacctgtttctacttgggcacagaactgaacgtggatgatgac
cccacaccgtgtgcgtttgctgggaatgggcgcgattgtgtgggcaacgggaccgagtgc
agaggaccgtgggaggggcctaacggcgggatcaccaactttgacaacatcttttttgcc
atgttgactgtgttccagtgtatcaccatggagggctggaccgatgtgctctactggatg
aatgatgcaattggctttgaaataccctgggtgtactttgtctctctggtcatctttggc
tcgtttttcgtactcaaccttgtattgggagtgttgagcggagagttctccaaggaaaga
gagaaggccgtggctcgtggagagctgcaggacgcccagaataagaaacagatggaggag
gatatgtgtggttacatggactggcttatcgaggccgaggatgtggatgaggaaggaaac
aaacgtgctgctgttgccaagaagaaaatgatgaagaagtttggctggtataaacacagc
gaggacggagaatcggattcagactctgaatttgaagcatatctagatgacgacaatggc
tgctgcgcatctcttatggctaaaatgatggccaacagtttctgtgaacagctatgccaa
ctgaaccacgcctttcggaaaaactgccgtgtagcagtcaaatcccagaacttctattgg
ctggtgcttcttctggtgtttctcaacactgcagccagtgcctctgaacactacggccag
cccaagtggctcactgagatgcaggagcgggccaataagatcctgttgatgttgttcacg
ctggagatgctgttaaagatgtacagtttcggtttccagattcacttcatggctctgttt
aaccgcttcgactgcttcgtggtgtgtggtggcatcctggagacagtcttggtagagttg
caaatcatccctcccatcggcatctctgtgctgcgctgtgtccgcctgctcagggtgttc
aaagtgacacggcactgggcagccctatcaaacctggtcaattccctgctcaactccatg
aaggctatctgctccctgctgctcctgcttttcctcttcctcatcatcttctccctgctg
gggatgcagctgtttgggggcaagttcaactttgatgagactcagatgaagagaagcacg
ttcgacactttcccccaggccctgctcacctgcttccagatccttacaggagaggactgg
aatgctgtgatgtatgatgggatcatggcttatggcgggccagtcttcccacagatgatt
gtgtgtgtctacttcgtctccctctttgttgtcggcaactatatcctgctcaatgtcttc
ttggctatcgctgtggacaacttggcaggtggtgatggtggaaaaaagcaagtagaagag
aaaaaggatgatgaagaggactgggatgaagatgaagacaaagaggaagatgcggcgaat
gagatggatgactgggaggagaatgaggagttgagagccatcgagggtctggagggaatc
atgcctgtgaagcctgaatctgctccgaaagagaagattgaacccattccagatgggagc
tcctttttcattcttggaaagagaaactgccttcgagtggcctgtcacaatctcatccac
cactcctacttcaccaatctcatcctcgtcttcatcatcgccagtagtatttctctggcc
gctgaggatccaatcagagctcactcctttaggaacaacatgcttggctacgctgattat
gcattcacctccatattcactgtggaaatcatactgaaggtgacggtttttggtgcgttc
cttcatcctggttccttctgtaggaatgccttcaacctcctggacctgctggttgtcagt
gtgtctctcgcgtccttcttcctccattccagcgctatctctgtggtcaagattttcagg
gtactcaaagtgctcaggcctcttcgagcaatcaacagagccaagggactcaagaatgta
gtgcagtgcgtgtttgtggcaatcaaaaccatcggaaacatcttgatcgtcacaacgctc
ctccagttcatgtttgcttgtattggagtgcagctcttcaagggaagattctacagttgc
accgatgaagctaaacacactccatatgagtgcatggggacgtttgtggtgtataaggac
ggtgatatgaatcaccctatggtgagagagaggaaatggcaaaacagtgaattcaacttt
gacaatgtgctgcagggcatgctggcccttttcactgtgtctacatttgaaggctggcca
cagctgctgtacaaggccatcgacgccaatgctgcgaaccacggccctatctacaactac
cgtgtggaaatctccatattcttcatcatctacatcatcatcatcgccttcttcatgatg
aacatcttcgtgggcttcgtcatcatcactttccgtgaacagggagaatctgagttcaaa
aactgcgaactgaacaaaaatcaaagacagtgtgtacagtacgctctgaaagccaagccc
atcaagatctacattcccagaaacccgtcccagctaaagttctggaaaatcatcgcctcc
agccaatttgagtacatcatgtttgtcttaattcttctcaacaccctcaccttggctgtg
cagcattatcagcagtctaaaacattcaactctgtgatggacatcctcaacttgatcttc
acagccctatttaccatagagatgatcatcaagctactggctctcagaacacatcaatat
ttcattgatgcctggaactcctttgacgctctgatcgttgtgggcagtgtgctagacatc
gtggtctcagagcttagtggaggagacgaggatgttgaagccatcgaggctgcagctcaa
gctgcagctgtagccgttcccggagctccgcccggggccaagaaggaaagcggaaaagtg
tccatcacattctttcgtttgttccgagtcttgcgattggtcaagctgctcagcaaaggg
gagggcattcgaaccctcctctggacttttgtcaagtccctccaggccttgccatatgtc
ggtctacttattgcaatgattttcttcatctacgctgtgatcggcatgcagacatttgga
aagattgctatagatgacaactcacatatcaacaggaacaacaacttccagaccttcttc
atgtctgtcctgctgctcttcaggtgtgccaccggagagcagtggcaggagatcatgttg
gcagcgttgccagggagaccctgtgaccccgagtcagactttgagcccggggatgacaac
atgtgcggcagcaacctggcttacatctacttcatcagcttcttcatgctctgcgctttc
ctgatcattaacttgttcattgctgtcatcatggacaactttgagtacctgaccagagat
tggaccgtactgggtactcatcacctggacgagttcaaacgagtctggtcggattatgac
ccagaggccacgggtcgaatcaaacatatcgatgtggtcactatgctgcgcaggatccag
ccaccccttggttttggcaaactttgcccccatcgtgtggcctgcaagaggctggttgct
atgaacgtgccgctgcacagcgacgggacagtcaccttcaatgccaccctgtttgcgctg
gtcagaacctcactgaagatcaagaccgaggggcctgttgaccaggacaacgaggagctc
agggccatcattaagaagatatggaagcgcactaagcccaagctccttgaagaggtcatt
ccaccccctagaggggaagaggtgacttgtgggaagttctatgccagcttcctgatccag
gactactttaaaaagttccgcaagaggaaggagcgggagaggaagaagaagggaaaggac
aagaaagactcactccaggcagggctcaggtcactgcaggcactggccccagagttgcat
ctggccttggcaatggagggagaggatgaggagggtgtggagggagagttggatgaagag
ttcttcaagaatgacaacgttttcgaagatcctggcacttctgccacaagtactccatcc
accactcacatgccagctgacatagaggagggcaccaccactatcttcatggagcccttc
atcgagcccacaatatccagcaacgtggtcacagaacagccattgacagtcagcgagaaa
ccagaatcggctctctcatcctttgatgtagtgatggaacagcccacgagatctgaggcc
atccctccaccagaagacacaccagccccagccccgccccaaccagccccagccgcatca
ccaccaaaagatccatcccctccccaaccagcaccagccgcaaacccaccaaatgcccca
tcccagccccaaccagcccctgttgcatcctcaccaaatgttgcttctccaccacaggtg
gttgctcaatccccacctcaaatagtgttagccccaccagaaccagaggcacctcaaata
gtgttagaggcagcccctgccccacctcaaccagagccattgatggagggaagaggaggt
gaaacttccactccacagcaggtgtactacccacagtacccagtggacagaccaacaaac
aatggtcatgtgtatcaagagcaacctgtagcatcccctatcccgtcagactacatgcag
agtcctactcctaacttcaccaatgggagagctgcaggagtgccctacgccaatggaaac
ggcatgaatgggaacgtctacaatggcggtacgaatggaggtagtgtgaatggaggtagc
atcaccggaagtagcatgagtggctacactggcaatggttacaatggaaatggctacaat
ggaaacggctacaatggcaacggtaacgcatttgagcagtatgtccggagacgtgttctt
cctcccactcctgcaggtcgcaagccgccctcctttaacatccagtgtctgagggcacag
catagcgcagatgacatccccatccctggcacgtacgagagtaactcgcccccatgtaga
tccagactgccccttgactcccgccgcagcagtgcctcctccatgtcctctgcctcctgg
gccaacaacggaggaggacatgcagggtcgacgccaggagcaggggtgtcggcagcatca
gcgaagagagggcgtctgctctacgcccctctgatgctggtggatgagggcaggggcacc
aagcaggtgtggggagacaggacccaggccacctccagcctccctgctattgcaaccagg
cccagtggctggtaccctggagccccgacactccctgtgcccaccccccagaacaggagc
tacaccaatggcagggtgccctcccagatcagccagagcctcatcgagaagggcagtgca
gacagcctggtggagtcgatcctgatatcggaaggcttgggcctctatgcaagagaccca
aagttcgtgaacttcgccaagcgagagatcgcggacgcatgtaacatgaccattgatgag
atggagaacgcagccacagacctgctgacccgttcagcgggccagccaataggacgcttc
gaggaggagctggctgacgagatgaactgtgtgatttcctactga
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integrated database retrieval system
