Salmo trutta (river trout): 115168425
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Entry
115168425 CDS
T08542
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
KO
K19656
intraflagellar transport protein 122
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115168425 (ift122)
Cilium and associated proteins [BR:
stru03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
115168425 (ift122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_2nd
Beta-prop_IFT122_1st
Zn_ribbon_IFT122_C
Zn_ribbon_IFT122
Beta-prop_EML_2
TPR_IFT80_172
TPR_GEMI5
TPR_IF140-IFT172
WD40
WD40_WDHD1_1st
EIF3I
TPR_COPA_B
TPR_7
WD40_CDC20-Fz
WD40_Prp19
WDR55
TPR_2
Beta-prop_IFT140_2nd
TTC7_N
TPR_12
Motif
Other DBs
NCBI-GeneID:
115168425
NCBI-ProteinID:
XP_029579540
Ensembl:
ENSSTUG00000007689
LinkDB
All DBs
Position
30:28386996..28423511
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AA seq
1122 aa
AA seq
DB search
MMNGVVSIRNKNGEEKVKIERPGGSSSPIWSIAWNPSKDWWKWMPFCEGEDDEAVDVDSS
MPEPLCLLIDTAYSQSCSSRVEVLGLGRQLERERQAGRGAETDRSGGEEGEPMLQGAFSD
PDHFSQLRDEHNDILAVADWGQKLSFYQLSGKQIGKDRTLTYDPCCVSYFSKGEYIVMGG
SDKQASLYTKDGVRLGTIGEQSSWVWTCRVKPDSNYVVLGCQDGTIAFFQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRNRLAIQLPEKILIYELYSDDS
SDMHYRIKEKICRKFECNLLVVCSQHIILCQEKRLQCLSFTSIKEKEWLMESLIRYIKVI
GGPPGREGLLVGLKNGAILKIFVDNPFAITLLKQSTSVRCLDMSTSRSKLAVVDEHNTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVYSMSAVEVPQSAPMYQYLERRMFKEAYQIACLGVTDSDWRDLATEALEGLDF
DTAKKAFIRVRDLRYLELINSIEERKKRGESDTELFLADVYAYQGKFHEAARLYKRTGLE
SRALSMYTDLRMFEYAKEFVGAADPKNTRMLMSKQADWAKNSKEPRAAAQMYLTAGEHLK
AIDIIGEHGWVDMLIDIARKLDKAEREPLAKCAAYFQKLKHHGYASETYSKMGDLQALVH
LHVEARHWDEAFSLVEKHAQFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDIARENEERKEEMLKKFKRFQHLAELYHVYHSI
QRYTDEPFSSHMPETLFNISRYLLHNLTKDVPLGISKVNTLYALAKQSRTLGAFKLARHA
YEKLQDLHVPSRFQESMDLGSLTVRSKPYHDNEDLIPMCYRCSTNNPLLNSQGSVCINCK
QPFIYSASSYEVLPLVQFYLDKGIGDEEAVSLIDLEVPCIDRKAARWQEMSSGESQSLKL
DDGTEDIEEDPFMAKLSFEQGGSDFVPVVVSRSVLRSMSRRDVLIKRWPKPLQWEYYRSL
LPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggggtggtgagcatcaggaataagaacggagaggagaaggtgaaaatagag
cgaccaggaggatcctcctctcctatctggtccatcgcatggaacccctccaaggactgg
tggaagtggatgcccttctgtgagggagaagatgacgaggcggtggatgtggacagtagc
atgccagagcccctgtgcctgctcattgacaccgcctacagccagagctgcagtagcagg
gtagaggtcctggggttaggcaggcagctggagcgagagaggcaggcaggaagaggagca
gagacggacaggtctggaggagaggagggggagcccatgctgcagggagcgttctctgat
ccagaccacttcagccagctcagggatgagcacaatgacatcctggctgtggcagactgg
gggcagaagctgtccttctatcagctcagtggaaaacagattgggaaggacagaactctg
acctatgacccctgctgtgtcagctacttctccaagggggagtacattgtgatgggtggc
tcggataagcaggcctccctctacaccaaagatggggtgcggctcggcaccatcggggag
cagagctcctgggtgtggacctgtagagtcaaacctgactccaactatgtggttttgggc
tgccaggatgggaccatagccttcttccagctcatcttcagcacggtgcacggcctgtac
aaggaccgctatgcctacagagacagcatgaccgatgtcatcgtccagcacctcatcact
gaacagaaagtgaggatcaagtgcagagagcttgtgaagaagatagctatctacaggaac
cgcctggccatccagctgcctgagaagatcctcatctacgagctttactctgacgactcc
tcggacatgcactaccgcatcaaggagaagatctgcagaaagtttgagtgcaacctgctc
gtggtctgctctcagcacatcatcctgtgtcaggagaagaggctgcagtgtctgtccttc
accagtatcaaggagaaggagtggcttatggagtctctgattcgctacatcaaagtgatt
gggggcccaccgggcagagagggcctactggtggggctaaagaatggagctatcctaaag
atctttgttgacaacccatttgccatcactctgctgaagcagtctacgtcagtgcgttgt
ctggacatgagtacatcccgcagcaagctggccgtggtggacgaacacaacacctgcctg
gtttacgacatccacaccaaggagctgctcttccaggagcccaatgctaacagcgtagcc
tggaacacccagtgtgaggacatgctgtgtttctcaggcagcggctacctcaacatcaag
gccagtaacttcccagtgcatcagcagaagctgcagggcttcgtggtgggctacaacggc
tccaagatcttctgcctgcacgtgtactccatgtccgccgtggaggtgcctcagtcggct
cccatgtaccagtatctggagaggaggatgttcaaggaggcctatcagatcgcctgcctg
ggtgtgactgacagtgactggagggatttggccacggaagcactggaggggctcgacttt
gacaccgctaagaaggcattcatcagagtacgagacctgcgctacctggagctcatcaac
agcattgaggagaggaagaagagaggtgagagcgacactgagctgttccttgcggatgtc
tatgcctaccaggggaaattccacgaggctgccaggctctacaagaggactggcttggag
tccagagctctcagcatgtacacggatctgcgcatgtttgagtacgctaaggagtttgtg
ggcgcggcagaccctaaaaacactcgcatgctgatgtccaagcaggccgactgggctaag
aacagcaaggagccgcgggccgctgctcagatgtacctgactgcaggagaacaccttaag
gccatcgacatcataggagaacacggctgggtcgacatgctgattgacatagcccgtaaa
ctggataaggcggagcgcgaaccactggctaagtgtgcggcctacttccagaagctgaag
caccatggttacgcctctgagacctactccaagatgggagacctgcaggccctggtgcat
ctgcacgtggaggcacgacactgggacgaggccttctctctggtggagaaacatgcccag
tttaaagatgacgtctatgtgccctacgctcagtggctggctgagaacgaccgctttgag
gaggcacagaaagcgttccacaaggcgggccgacagagcgaggctgtgaaggtgttggaa
cagcttacccacaatgccgtggtggagagcaggttcaatgacgcagcatattattactgg
atgctctctatgcagtgtctggacatcgctagggaaaacgaggagaggaaggaggagatg
ctgaagaagttcaagcgtttccagcacctggctgagctctaccatgtttaccactcaata
cagcgttacacagatgaaccctttagctcccatatgcctgagacgctctttaacatctcc
aggtacctcctacacaacctcaccaaggacgtgccactgggcatctccaaagttaacact
ctttatgcgttggccaagcagagcagaaccctgggagcgtttaagctagccagacatgcc
tatgagaagctccaggacctccacgttccctctcgcttccaggagtcaatggacctgggc
agccttaccgtccgctccaaaccataccacgacaatgaggacctgatccccatgtgttac
cgctgctccaccaacaaccccctgctgaacagccagggcagtgtgtgtatcaactgcaaa
cagcccttcatctattcagcatcttcatacgaggtccttcctctggtgcagttctacctg
gacaagggtatcggtgatgaggaggctgtgtctcttattgacttggaggtcccttgcatt
gacaggaaggcagctcgctggcaggagatgagcagtggggagtcccagtctttgaagctg
gatgatggcacagaagacatagaggaggaccccttcatggccaaactcagctttgagcag
gggggctctgactttgtcccggtggtggtgagtcgctccgtgctgaggtctatgagcagg
agggatgtcctgatcaagcgctggcccaaacccctgcagtgggagtactaccgctcctta
ctgcctgatgtcagcatcaccatgtgcccctcctgcttccagatgttccacagtgaagac
tatgagctgcttgtgcttcagcacaactgctgtccctactgccgtcggcccatcgatgaa
cccaactga
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integrated database retrieval system
