Salmo trutta (river trout): 115168426
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Entry
115168426 CDS
T08542
Name
(RefSeq) plexin-D1-like
KO
K06822
plexin D
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115168426
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
115168426
NCBI-ProteinID:
XP_029579545
Ensembl:
ENSSTUG00000009225
LinkDB
All DBs
Position
30:complement(28428324..28537800)
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AA seq
1900 aa
AA seq
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MPPSEKIVVLILGVLVLESAWNAHHSPCLANALQIQQAFASPNQTNNFVVDEVSRKVYLA
TVNTVYQLNGTLSVEVEKRTGPVEDNLLCHAPQLPQAPCEHPKSLTDNFNKLLELDREQG
VLVICGSVYQGFCELRKMENISEIAVEFPPHGEKTVFPSMLNIAANHPNASTVGLIFRSH
GGNTRLLVGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNINDLSRLFTYDINPSED
NVFKIKQEVKQKNKLNFVHAFIQKTYAYIAINNDANMGHKQSQPNSILARICLDTENTRK
STSESRKLTESFIQMPLQCGYNGNIYNRLVSVHPAVIHSVTGEGLESHLFGVFTKSDRMS
ALCAFRFSDIEEEIRQGRRNCSNSPSSDVQVLDSVIQGSGAACVHKGNLVLQPEQLDCGA
AHLQHPLALRRPLRATPLFVSLGLSSVAVDNIHNHTVVFLGTSTGRLRKLTLLKNLTVAN
QWALKLPAGESVHHIMTFDPMDRNYLYLMTSHHLLRVKVAACGQYRSCSDCLGAGDAHCG
WCTLESRCSIQRECSGGLMVRSWIGMGEGPQQCPSMTLTPQEISLSADVKDVGILINGSV
PDLVGSRVECDYGLGIATVATVHLDYGPAQIQTCPLLPRERYPHIPPGRDHLMVPVAIKV
NGTSVVSGTFIIYDCERTGVIHPKTACISCLSTRWRCYWDQNSHSCLSTKDDSKPSLLEN
SASCPSLVAKDVPPSPSGITQDFTLSLSNVDQQEELECDFGSEQRYEARWLNSGSEVKCS
GVMLTTAERSQVFQLSLRRKGQLDKYIDSPKPMIVEVYNCGVGSGDCSQCWGREDQGHLC
GWCDNICRPRDDCQYMSSQCPDPEITKISPLSGPLEGGTLLTVQGRNMGRRADVVKVSIG
MVPCKILPYQYTVSIQLVCVTGQTFDPINYVVRVTVNQNAMGVSKEVFSYLVPKLLSMEP
RKGSRSGGTRVTIRGEHLDTGSQVRVKVNGTQDCIILTLTKDTIECTIPAALHTHTEAVS
VCVEFEDIPCQSSELLTQYIYEKNPTISYIKPRKSYLSGGRTITVTGQGFDLVQSVTMEV
LGIGQDACKVWSPSMITCSSPASSQSQQATVEFLLNGVLYMGDGPAFDGPDQEEEEEPHG
GHFLLEYVEDPQFFTANKEKLIKHHPGEPLTLIINKGPSDLELAPEEYSVMIGSYPCDIS
FHNNQLFHCTINGSLGSSEGELPVTVRVGNFQRIIAKVQLGGSELAIVVSIVVCCVLLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIRDEIRKGFAELQTDMTDLTKELNRSQG
IPFLEYKQFVTRTFFPKMCSDYERSLVQPVYENDALGPRALPETHPLLQDWQPSNTAKPN
MEEGITLFSTLLNNKHFLVTFVHALEQQKDFAIRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASAAKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIRQQI
NKGSIDAITGKARYTLNEEWLLRENVEAKPQNINVSFQGCGMDSLAVKVVNTDTICQVKE
KILEAFYKNLPFSQWPRAEDVDLEWFASGSNSRILQDLDNTSVMEDGRKKLNTVTHYQIP
EGASFAMSMKDKRDNTLGRAKDLDTEKYVHLVLPHDEPFENKKSHRQSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFLAILSIPAERPPLAIKYFFDFLEEQADKRGITDPDTLHIWKTN
CLPLRFWVNILKNPQFVFDIEKTDHMDACLSVIAQAFIDACSVSDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYKQIHEMAPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKKYR
NQVVSALESNPTAKRTQLHHKFEQVIALVEDNIYECSSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcggagaagatagtagttctgattctcggcgttctggtgctggaatcggcc
tggaatgcccatcacagcccgtgccttgccaacgcgttacagatccaacaggcgttcgcc
tctccaaaccagacaaataactttgtggtggatgaggtcagcagaaaagtctacctggct
acggtaaacacggtgtaccagcttaacgggaccctgagcgtagaagtggagaagagaacg
gggccggtggaggacaacctgttgtgccatgcgccgcagctgccccaggcgccctgcgag
caccccaaatccctcaccgacaacttcaacaagctgctcgagctggacagggagcagggg
gtgctggtgatatgcggctcggtgtaccagggcttttgcgagctcaggaagatggaaaac
atatcggagatagccgtggagttcccccctcatggcgagaagaccgtgttccccagcatg
ctgaacatcgccgccaatcaccctaacgcctccaccgtggggctcatcttcaggagccac
gggggtaacacccggctcctcgtcggggccacttacaccggcgctgggacccagtttttc
cccaagaaccacagcaaggaggacctgcgcttcgagaacacacccgaaatcgccattcgg
tccctgaacatcaatgatttatccaggctgttcacctatgacatcaacccgtccgaggac
aacgtcttcaagataaaacaggaggtgaagcagaagaataaactaaacttcgttcatgcc
ttcattcagaagacctacgcttatattgctatcaacaatgacgcgaatatgggccacaag
cagagccagccgaacagcatacttgcaaggatatgcctggacactgagaacacacgaaaa
tccacctcggagagccgaaagctcactgagtccttcatccagatgccccttcagtgtgga
tataacggaaacatctacaaccggctagtctccgttcaccccgcggtgatccactcggtg
accggagaggggctggagtcgcaccttttcggagtgttcaccaaatcggacagaatgtct
gccctgtgtgcgtttcggttctcagatatcgaggaggagatccgtcagggccggaggaac
tgctccaactcccccagcagcgatgtgcaggtgcttgacagcgtcatccagggttcgggc
gcagcatgcgtacacaaaggaaacctggtgctgcaaccggagcaactggactgtggagcg
gcccacttgcagcacccgctggccctacggaggcccctgagggccacgcccctgtttgtg
tccctgggcctcagctcggttgctgtggacaacatacacaaccataccgtggtgtttctg
ggcaccagcactggacgactgcgcaagctgaccctcctgaagaacctgactgtggccaat
cagtgggctctgaagctcccagccggcgaatcagtgcaccacatcatgacctttgacccc
atggacaggaactacctgtacctcatgacctctcaccatctcctgagggtgaaggtagca
gcatgtggccagtacagatcctgcagtgactgtttgggtgccggcgacgcccactgtggc
tggtgcacgctagagagcaggtgttccatccagagggagtgttccggggggctgatggtg
cgctcctggatcggaatgggtgagggtccccagcagtgcccctccatgaccctcaccccc
caagagatcagcctctccgctgacgtcaaggatgtggggattctgataaacggcagtgtc
cctgatctggttggttcccgggtagagtgtgactacggattgggcattgccactgtagcc
actgtgcacctggactatggccccgcccagattcagacctgccccctcctgccccgggag
aggtacccccacatcccccctggcagagatcacctgatggttcctgtggcgattaaggtg
aatggcacgtctgtggtttccgggaccttcatcatctatgattgcgagaggacaggagtg
atacaccccaagactgcgtgtatcagctgtctaagcaccaggtggagatgttactgggac
caaaacagccactcttgcctctccactaaagacgactccaaacccagcctgctagagaat
tctgcttcctgtccaagccttgtggccaaggatgttccaccatcaccctcagggataacc
caagacttcaccctgtcgctaagcaacgtggatcagcaggaggagcttgagtgtgacttt
gggagtgagcagcggtacgaggctcgatggctgaacagtggctcagaggtcaagtgcagt
ggagtgatgctgaccacagcggagaggagtcaggtgtttcagctcagcctgcggagaaag
ggacaactggacaagtacattgacagccctaagcccatgatcgtggaggtgtacaactgt
ggggtcggcagtggggattgttcccagtgttggggacgtgaggaccagggtcatctgtgt
ggctggtgtgacaacatctgtagacccagggatgactgccagtatatgagtagtcagtgt
cctgaccccgagatcaccaagatctcccccctgagtggaccgttggaggggggcaccttg
ctcacggtgcagggcaggaacatgggccgcagggctgacgtggtgaaggtctccatcggg
atggttccatgtaaaatcctgccttaccaatacactgtctctatacagctggtgtgtgtt
actgggcagacctttgatcccataaattatgtcgtcagagttaccgtgaaccagaatgca
atgggggtgtccaaagaggtcttctcatacttggtccccaagctgctgtctatggagcct
aggaaaggctctcgttcagggggaaccagggtgaccatcaggggggagcacctggacact
ggctctcaggtcagagtcaaggtcaacggcacccaggactgcatcatactcacgctaacc
aaagacaccatcgagtgcaccatacctgcggccctgcacacacacactgaggcggtgtcg
gtgtgtgtggagtttgaggatattccttgtcagagctctgagcttctcacccagtacatc
tatgagaaaaaccccaccatcagctacatcaaacccaggaagagctacctcagtggcggt
cggaccatcacagtgacggggcaaggttttgacctggtgcagagcgtcactatggaggtg
ctgggcatcggacaggatgcctgtaaagtgtggtctccctccatgatcacatgctcctcc
cccgcctccagccaatcccagcaggccacggtagagttcttgctgaatggagttctctac
atgggagatggccccgcctttgacggcccagaccaggaagaagaggaggagcctcacgga
ggtcacttcctgttggagtatgtggaagatcctcagttctttaccgccaacaaagagaag
ctgatcaaacaccaccctggagaaccactcacactcatcatcaataaaggaccgagcgat
ctggagctggcgccagaggaatactcagtgatgattggctcctatccctgtgacatcagc
ttccataacaaccagctgttccactgtaccatcaacggttcgctgggctccagtgaggga
gaactgcctgtcacagtgcgggtgggtaacttccagaggatcatagccaaggtgcagctg
ggaggtagtgagctggccattgtggtgtccatcgtggtgtgctgcgtgctgctgctgctg
tgcactgtggctctagtggtgtactgtactaagagccggagggcggagcgctactggcag
aagactctgctgcagatggaggagatggagtcccagatcagagatgagatccgcaaaggc
tttgcagagctacagacagacatgacagacctgaccaaggagctgaaccgcagccaggga
atccccttcctggagtacaaacagtttgtcacacgcaccttcttccccaagatgtgttcg
gactatgagaggagtctggtccagcccgtctatgagaacgacgccctcggtccacgagcc
ctccctgagacacacccccttctgcaagactggcagccctctaacacagccaagcctaac
atggaggagggaatcactctcttctcaactcttctcaacaacaagcacttcctggttacc
tttgttcatgcactggagcaacagaaggactttgcaatacgcgacaggtgtagcctggca
tccctgctcactattgccctccatggtaagctggaatactacaccagcattatgaaagat
ctgctggtggatctgatcgatgcctcggccgccaagaaccccaagctgatgctgcgacgg
acagagtctgttgtggagaagatgctaaccaactggatgtccatctgcatgtacagctac
ctcaaggagacagtgggcgagcccttcttcctgctgctttgtgccatcaggcagcagatc
aacaagggttctatagacgccatcacagggaaggcccggtacacactgaacgaggagtgg
ctgctcagagagaacgttgaggccaagccacagaacatcaacgtgtcgttccagggatgt
ggtatggactctctggctgtgaaggttgtgaacacagacaccatctgtcaggtgaaggag
aagattctagaggccttctataagaacctgcccttctcccagtggccccgggcagaggac
gtagacctggagtggtttgcttctggtagtaatagcaggatcctccaagacctggataac
acctctgtgatggaggatggcaggaagaaactcaacacagtcacacattaccagatccca
gagggggcgtcattcgccatgagcatgaaagacaagagagacaacaccctggggagagcc
aaagacttggacacagagaaatatgtccatttggtcttgcctcatgatgagccgtttgag
aataagaagtcccacagacagagtcatcgtaagaaggtcctccctgagatctacctaacc
cgcctcctctccaccaagggaacactgcagaagttcctagatgacttgttcctggccatc
ctcagtattcctgcagagcgtccgccgctggcaatcaaatacttctttgacttcctggag
gagcaggcggacaagaggggcatcaccgaccccgacaccctgcacatctggaagaccaac
tgtttacctctgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacatt
gaaaagacggaccatatggacgcctgtctgtctgtcattgcccaggccttcatagatgcc
tgctccgtttcagacctgcagctgggcaaggactctccgactaacaagctgctgtatgcc
aaggagatcccagaatacaagaagagggtacagtgctattacaaacagatccatgagatg
gcgccactgagtgagcaggagatgaacgcccacttggccgaggagtcacggaaatacaga
aatgagttcaacaccaacctggccttgacggagatctacaaatacgccaagaaatacagg
aaccaggtggtgagtgctctggagtccaaccccacagcgaagcgtactcagctgcaccac
aagtttgagcaggtcattgctctggtggaggacaacatctatgagtgtagcagtgaggcc
tga
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