Salmo trutta (river trout): 115169789
Help
Entry
115169789 CDS
T08542
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115169789 (dhx9)
03012 Translation factors [BR:
stru03012
]
115169789 (dhx9)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115169789 (dhx9)
5.6.2.6 RNA 3'-5' helicase
115169789 (dhx9)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115169789 (dhx9)
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115169789 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
115169789
NCBI-ProteinID:
XP_029581597
Ensembl:
ENSSTUG00000018383
LinkDB
All DBs
Position
31:23784904..23816889
Genome browser
AA seq
1329 aa
AA seq
DB search
MRPKSRPDRLVPQCYHVCCLNGLHLLAGSFEKVSGGGRVEIYKSAMADIKNFLYAWCGKK
KLTPSYDIRAAGNKNRQKFLCEVRIEGFNYTGMGNSTNKKDAQANAARDFVNYLVRVGEM
NAAEVPALGASGPDFSVPDCGGGVDGGNASFGSLPPSGPIPPHLVVKAEQVNAPSAPVPG
VTGLGYSGGSGDYSGGGANSNAPWDRGANLKDYYSKRDEQEAQATLESEEVDLNAGLHGN
WTLENAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMQLFVRQLGRKIIAREHGSNK
KLAAQSSALSIVRQLYHLGVIEPYSGVTKKKEGEILEAFEVNVVDDLQHQLQSMAQDLGV
VIPPPPPDPSTPVSLVQGKMAVFEPSQRQSMAGVVPWSPPQVNWNPWTSSNIDDGPLAFC
TPEQISTDLHHELTYQLEQDQSLQKVIGERDGLPVKNFEEEIMTAVQGSSVVIIRGATGC
GKTTQVPQYILDQFIKSGRASECNIIVTQPRRISAVSVAERVSYERGEDVGKSCGYSVRF
ESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMVVLRDVVQTYP
EVRIILMSATIDTTMFREYFFNCPVIEVFGRTFPVQEYFLEDCIQMTHFIPPPSDRKRKD
KDEEGGDEEANCNVICGPEYTPETKRSMAQMNEKETPFELVEALLKYIETLQVAGAVLVF
LPGWNLIYSMQKHLEMNPHFGSQRYLILPLHSQIPREEQRRVFEPVPENITKVILSTNIA
ETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWGSKTNLEQRKGRAGRVRAGFCFHL
CSRARFDKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAIEPPPLDAVIEAEHTL
RELDALDTNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTISAASCFPEPFIND
GKRLGYVHRNFAGTRFSDHVALLSVFQAWDDVRMGGEDAESRFCEHKRLNMSTLRMTWEA
KVQLKEILINSGFPEECLMTQMFNNVGPDNNLDVVISLLTYGSYPNVCYHKEKRKILTTE
GRNALIHKCSVNCPFSSQDMTYPSPFFVFSEKIRTRAISAKGMTLVSPLQLILFASKKIT
SNGEIIELDDWIKLKIPHNVAGCIAALRAGMEALVVEVTKDPEYIKQLDPTNERMLNIIR
QISKPSAAGLNLMVNNKRFGDGPRPPKMGRFDGGGGGYQGGGGGSGYRGGGGSGYRGGGY
RGSGGYQGGGGYRGGGGYRGGGGYGGGNRGGGGYRGGNRGGGGYGGGNWGGGGYGGGNRG
GEYRGGQGY
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaaagtccaggcctgaccgtctcgtgccccagtgctatcatgtctgctgtctg
aatggtttgcatttgctagccggctcgtttgaaaaagtatctggtggaggtcgagtggag
atttacaaatccgccatggcggacatcaagaacttcctgtatgcttggtgtgggaagaag
aaactaacacccagctatgacattcgagccgctggaaacaaaaaccgacagaagtttctg
tgtgaggttcgtattgagggattcaactacactggaatgggaaactccaccaataagaag
gatgcccaggcaaatgctgctagagactttgtcaattatcttgtccgagttggagaaatg
aatgcagcagaagtcccagcccttggggcaagtggacctgacttcagtgtgcctgactgt
ggaggaggggttgatggagggaatgctagctttggaagtcttcctccaagtggacctatc
cctcctcacctggttgttaaagctgagcaagtgaatgcaccttctgcgccagtcccaggt
gtcactggtttgggatattcgggcggtagcggtgattattccggaggtggcgcaaacagc
aatgctccgtgggatcgtggggctaatctaaaggactattactcaaagagggatgagcag
gaggcacaggcgactctggagtctgaggaggtagatctgaacgcaggactccatggcaac
tggactttagagaacgccaaggcccgtctgaaccagtttttccagaaggagaagaatcaa
acagattacaaatacagccaagttgggcctgaccacaacaggagctttattgctgagatg
cagttatttgtaagacagcttggtagaaagataattgcccgtgagcatggctctaacaag
aagcttgcggcccagtcctctgcgctgtctatcgtccgtcaactttaccatctaggtgtc
attgagccttattctggcgttactaagaagaaagagggggaaattttggaagcttttgag
gtgaatgtggtggatgatctgcaacatcagctgcagagtatggcccaagatctgggtgtt
gtaattccacctccaccacctgatccaagtactccagtgtctttggtccaagggaagatg
gctgtgtttgagccctcccagagacagagcatggccggggtggtgccctggtcccctccg
caagtcaactggaacccctggaccagcagcaatattgacgatggaccactagcattttgc
accccagagcaaatcagcactgacctccatcatgagctgacttatcaattggaacaagat
caaagcttacagaaggtcattggggagcgagacgggcttccagtgaagaactttgaggag
gagataatgactgccgttcagggcagctcagtggtgatcattcgaggggcgaccggctgt
ggcaaaaccacccaggttcctcagtacatcctggatcagttcatcaagagtgggagggcg
tccgagtgtaacattattgtaacccagccccggcgtatcagtgcagtgtctgtggcagag
cgcgtttcctacgagagaggagaggatgttggtaagagctgtgggtacagcgtccgcttt
gaatccatcctcccacgaccccatgccagcatcatgttttgcactgtcggtgtgttactg
cggaagctggaagcaggtattcgcgggatcagccatgtgattgtggatgaaatccacgag
agagacatcaatactgacttcctcatggtggtgctgagggacgtggtccagacctaccca
gaggtccgcatcatccttatgtctgccaccatcgacaccaccatgttcagagagtacttc
ttcaactgccctgtcatcgaggtgttcggccgcacattcccagtacaagagtactttttg
gaagattgcattcagatgacgcatttcattccacctccgagtgatagaaagaggaaggac
aaggatgaggaaggaggagatgaagaggccaactgtaatgtgatatgtgggccagagtac
accccagagactaagcgctccatggcccagatgaatgagaaggagactccctttgagctg
gtggaggccctgctgaagtacatcgagaccctccaggtggccggggccgtgcttgtcttc
ctgcccggctggaacctcatctactccatgcagaaacacctggagatgaacccacacttt
gggagtcaacggtacctgattctgcctctccactctcagatccccagagaggagcagagg
agggtatttgagcctgtacctgaaaacatcaccaaggtgatcttatcaacaaacattgca
gagaccagtattaccatcaatgatgtagtatatgtcatcgactcttgcaagcagaaagtg
aaactgttcacgtctcacaacaacatgaccaactacgccacggtctggggctccaagacc
aacctggagcagaggaagggtcgcgccggccgcgtccgggctggcttctgcttccatctg
tgtagcagagcacgcttcgacaaactggagacccatatgacccctgagatattccgtact
cctctccacgaggtagccctgagcatcaagctgctgagactaggagccattggccatttc
ctttccaaggccatcgaaccccctcccctggacgcggttatagaggcagaacacacactg
agagaactggatgctttggacacaaacgatgagttgactccgcttggtcggatccttgca
aagcttccaatcgagccgcgtctggggaagatgatgattatgggctgcattttcaatgtt
ggagatgcggtgtgcacgatctcagcagcctcctgcttcccagagcccttcatcaatgat
ggcaagcgcttgggctatgtgcaccgcaactttgctggcacccgcttctcagaccacgtg
gcccttctgtcagtcttccaggcttgggacgatgtgagaatgggaggtgaggatgcagag
tccagattctgtgaacacaagaggctcaacatgtccacactgaggatgacctgggaggcc
aaagtgcagctgaaggagatcctcatcaactctggcttccctgaggagtgcttgatgaca
cagatgttcaataacgttggacccgacaacaaccttgacgtggtcatctctctcctgacg
tacggttcctatcccaacgtgtgctaccacaaggagaagaggaagattctcaccactgag
gggcgcaatgccctcatccacaaatgctccgtcaactgccccttcagcagccaggacatg
acctacccatcaccgttctttgtctttagcgaaaagatccggactcgagccatctcagcc
aaaggaatgacactagtcagcccactccagctgatcttgtttgcctccaagaaaatcaca
tcaaacggggaaatcattgaactggatgattggatcaaactgaagataccgcataacgtg
gctggctgcatagctgctttgagggctggaatggaggcacttgttgttgaagtcaccaaa
gaccctgagtacatcaaacagctggatcccacaaacgagcgcatgctcaacatcatccgc
caaatctccaaaccctccgcagctgggcttaacctcatggtcaacaataaacgttttgga
gatggtccacgtcctcccaagatgggcaggtttgacggaggaggcggagggtaccaggga
ggaggtggcggctccggatacaggggaggtggcggctccggatacaggggaggaggttac
agaggcagtggaggataccagggcggcggcggatacaggggcggtggtggttacagaggt
gggggtggttatggaggggggaacaggggtgggggtggttatagaggggggaacaggggt
gggggtggttatggaggggggaactggggtgggggtggttatggaggggggaacaggggt
ggtgaatacagagggggccagggatattag
DBGET
integrated database retrieval system
