Salmo trutta (river trout): 115171017
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Entry
115171017 CDS
T08542
Name
(RefSeq) sequestosome-1-like
KO
K14381
sequestosome 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04140
Autophagy - animal
stru04217
Necroptosis
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115171017
04137 Mitophagy - animal
115171017
09143 Cell growth and death
04217 Necroptosis
115171017
04218 Cellular senescence
115171017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115171017
03029 Mitochondrial biogenesis [BR:
stru03029
]
115171017
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115171017
Membrane trafficking [BR:
stru04131
]
Autophagy
Mitophagy
Cargo receptors
115171017
Pexophagy
115171017
Aggrephagy
115171017
Xenophagy
115171017
ER-phagy
ER-phagy recepters
115171017
Other autophagy associated proteins
Midbophagy
115171017
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115171017
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115171017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
NANM
Motif
Other DBs
NCBI-GeneID:
115171017
NCBI-ProteinID:
XP_029583327
Ensembl:
ENSSTUG00000039128
UniProt:
A0A674D056
LinkDB
All DBs
Position
3:complement(25372031..25379051)
Genome browser
AA seq
463 aa
AA seq
DB search
MSMTVKAYLLGKEDAPKEIRRIAVDQDVSTSFEYLKKKVEDVFSTLRNVTYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDYTFRLFIKEKKEQWREFPAFAFPGGVPPFAYPPPPGTPHM
GPPPPHGPHGHHGHHGHGHHGHGPPLVHPNVTCDECEGSVAGTRFKCTVCPDYDLCSTCQ
AKGLHKEHVLLPIWHPFNNAFEWFPRGKWMRKMRHCTWAQAQPGTSGSQPGQAAPGDRQT
SDASSAASQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVELEAKRTKVMTPNPTPPGSG
GPPSARSNNGTGGSEGDGTKEGDMEVDELSSLGSASDLVAGGKDAGGSGDDEWTHLTSKE
VDPSTGELQSLRVGEEGSLEAPGSPTVPQGPSQEPQKSLTLAEAAAYPHLPQDADPRLVE
SLSQMLAMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPAKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtcaaagcctatctccttgggaaggaggatgcgccgaaagaaattcgt
cgcattgctgtcgaccaagatgtttcaacgagttttgagtatctgaaaaaaaaggttgag
gatgttttctcaaccctgcgaaatgtcacctaccaaatgttttacaaagatgaagacggt
gacatgatcgccttctccactgatgatgagctcatcatgggcctcacctgcatcaaggac
tacaccttccgcctcttcatcaaggagaagaaggagcagtggcgtgaattccctgctttt
gccttccccggtggtgtcccccctttcgcctacccccctccccctggaacaccccatatg
ggacctcccccacctcacggtccccacggccaccatggtcaccatggtcatggccaccat
ggtcacgggccccccttggtgcaccctaatgtgacctgtgatgaatgtgagggctcggtg
gcagggacccgcttcaagtgcaccgtgtgccctgactatgacctgtgctccacgtgccaa
gccaaggggcttcacaaggagcacgtcctcctgcccatctggcaccccttcaacaacgca
tttgagtggttccctcgtgggaagtggatgaggaagatgaggcactgcacgtgggctcag
gcccagcctgggacctctgggtcccagccaggccaggcagccccaggggacagacagacc
tctgatgcctcatctgctgcctcccagcagtcccaagccaatatggattacctgaagaac
attggagaaggggtggcagccatgcttagcccactgggtatcgatgtggatattgatgtg
gagctggaggcaaagaggaccaaggtgatgacccccaatccgaccccacctgggtcagga
ggcccccccagtgctaggagcaacaacgggacaggggggtccgagggagatgggactaaa
gagggggacatggaggtggacgagcttagcagcctagggagcgccagtgatttagttgcg
ggtggcaaagacgcagggggcagtggtgacgatgagtggacccacctgacctccaaggag
gtggatccctctacaggggagctccagtctctcagggtaggcgaggagggctctctggaa
gccccagggtcccctactgtcccccagggtccctcacaggaaccacagaagtccctcact
cttgctgaggccgcagcctacccccaccttcctcaagatgccgacccacgcctggtggag
tccctgtcccagatgctggccatgggcttcacagatgagggtggctggctcacccgcctc
ctccacactaaggactgcgacgtcggggccgccctggacaccatccactactccaaaccc
gccaagaagtaa
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