Salmo trutta (river trout): 115171073
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Entry
115171073 CDS
T08542
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115171073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115171073
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115171073
Complex C
U5 SnRNP specific factors
115171073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115171073
NCBI-ProteinID:
XP_029583425
Ensembl:
ENSSTUG00000024845
UniProt:
A0A674AH95
LinkDB
All DBs
Position
32:complement(11556102..11572309)
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AA seq
970 aa
AA seq
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METDLYDEFGNYIGPELDSDEDDDLEADDRDADEADEDEDDEPADADEDVPGMEVVLHED
KKYYPTAEEVYGPEVETLVQEEDAQPLTEPIIKPVRNKQFTLMEQELPSTVYDMEFLADL
MDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDMDLRYTDILFTEQERGVGIK
STPVTMVLPDSRGKSFLFNIMDTPGHVNFSDEVTSGIRLSDGIVLFIDAAEGVMLNTERL
IKHAVQERLAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNAMLSTYSTDENLVVSP
LLGNVCFASSQYCVCFTLGSFAKIYSDTYGDINYTEFAKRLWGDIYFNPKTRRFTKKAPT
SNSQRSFVEFVLEPLYKILSQVVGDCDTSLPRVLDELGIHLVKEELKLNIRPLLRLVCKR
FFGEFTGFVDMCVQHIPSPQGGAKNKIEHSYTGGLDSDLGEAMAECDPDGPLMCHTTKMY
STEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWINVARYQIEVN
RVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELPK
MLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTF
CETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKY
DWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIIQGFQWGTREGPLCDE
PIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADC
VSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFH
HWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELA
KQDVVLNYPM
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggagacggatctgtatgacgagtttgggaactacattggtccagaactagactctgac
gaggatgatgatctggaggcagacgacagagatgcggatgaggctgatgaggatgaggat
gatgagccggctgatgctgatgaagatgtcccaggaatggaggtagttctgcacgaggat
aagaaatactatcctacagcagaggaagtgtacgggccggaggtggaaactttagtccag
gaagaggacgcacagcccctcacagaacccatcatcaagcctgtaaggaacaagcagttc
actctgatggaacaggagctaccttccactgtttatgacatggagttcctggctgaccta
atggacagtcccgagctgatccgtaatgtcaccctgtgtggccacctgcaccacggcaag
acatgtttcgtggactgcctgattgaacagacacacccagagatcaggaagagagatgac
atggatctccgttacacagatatcctcttcactgagcaggagcgaggggttggtatcaag
agcacccccgtcacaatggttcttccagactccagaggcaaatccttcctcttcaacatc
atggacacaccaggccacgtcaacttttcggatgaggtgacatcaggcatccgactctcc
gacggcatcgtgcttttcatcgacgcagcagaaggagtgatgttgaacacagagcgtctg
atcaagcacgccgtccaggagcgtctggccatcaccatctgcatcaacaaggtggaccgc
ctcatcgtggagctcaagctgccccctacagacgcctactacaaactacgccacatagtg
gacgaggtcaacgccatgctcagcacctactctacagacgagaacctggtggtgtctcct
ctcctggggaacgtgtgttttgccagctctcagtactgtgtttgcttcaccctgggctcc
ttcgccaagatctactccgacacctacggtgacatcaactacacagagtttgccaagagg
ctgtggggagacatttatttcaaccccaaaacgcgcaggttcactaagaaagcccccacc
agtaactcccagcgtagctttgtggagtttgtgttggagcctctgtacaagatcctatct
caggtggtgggtgactgtgacacatctctgcctcgggtgctggatgagctgggcatccac
ctggtcaaagaggagctgaagctcaacatcaggcctctactcaggctggtctgtaagcgc
ttctttggagagttcactggctttgtagacatgtgcgtgcagcacatcccctcaccacag
gggggcgccaagaacaagatagagcacagctacactggaggactggactcagacctgggg
gaggccatggcagaatgcgaccctgatggtcctctgatgtgccacaccactaagatgtac
agtactgaggacggggtgcagttccatgcgttcggccgggtgctgagcggtaccatccag
gcgggccagccagtcaaggtgctgggagagaactacactctggaggacgaggaggactct
caggtctgcacggtgggacgtctgtggatcaacgtcgccaggtaccagatagaggtgaac
cgtgtccctgctggcaactgggttctcattgagggctgtgaccagcccatcgtcaagacg
gccaccatcaccgagcccagagggaacgaggaagcccagatcttccggccgctcaagttc
aacacggcgtctgtcatcaagatcgctgtggagccagtcaacccgtcagagctgcccaag
atgttggacggactgcggaaggtcaataagagctacccctccctcaccaccaaggtggag
gagtcaggggaacatgttatcctgggtactggggagctctacctggactgtgtcatgcac
gacctgcggaagatgtactctgagatcgacatcaaggtggctgaccccgtggtgaccttc
tgtgagacggtagtggagacgtcgtctcttaagtgctttgccgagacgccgaacaagaag
aataagatcaccatgattgccgagcctctggagaagggcctggctgaggacatagagaac
gaggtggtgcagatcacatggaacaggaagaagctgggagagtttttccagaccaagtat
gactgggatctgctggctgccaggtctatctgggcctttgggcccgacaccaccgggcct
aacatcctggtagatgacaccctgccttctgaggtggacaaggctctgctgggctcggtt
aaggacagcatcatccagggcttccagtggggcaccagggaggggcctctgtgtgacgaa
cctatcagaaacgtgaagtttaagatcctggatgcggtcatagcgcaggagcctctacac
agaggaggaggacaggtcatccccacagccaggagagtggtgtactctgccttcctcatg
gccacccccaggttgatggagccctactacttcgtcgaggtccaggccccagctgactgt
gtgtctgccgtgtacacagtactggccagacggagaggtcatgtgacccaggacgccccc
atccccgggtctcccctctacaccatcaaggccttcatcccagccatcgactcgtttggc
ttcgagactgacctgagaacacacacacagggacaggccttctccctgtccgtcttccac
cactggcagattgtccctggtgaccccctggacaagagcattgtgatcaggccgctggag
ccccagcctgcccctcacctggccagagagttcatgatcaagacccgccggcgcaagggt
ctgagtgaggatgtgagcatcagcaagttcttcgacgaccctatgttgttggagctggcc
aagcaggacgtggtgctcaactaccccatgtga
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