Salmo trutta (river trout): 115171552
Help
Entry
115171552 CDS
T08542
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115171552
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115171552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
115171552
NCBI-ProteinID:
XP_029584352
Ensembl:
ENSSTUG00000012285
LinkDB
All DBs
Position
32:complement(25780734..25854264)
Genome browser
AA seq
1283 aa
AA seq
DB search
MTREEARGRGQECVMTDKEHEGGDGRTGRRTSDKDQSWIPNIIRKRVCTTFVEDSLSNGA
LCQCGGMRETHGSNATGDYFGAAIVSQWDSSQHSSEYPTDAFGELEFTGAGRRHSHFLRL
SCDTPPQIVYSLMTAHWGVPSPNLVVSVVGGGGCEKVKTWVREVLRQGLVKAAQRTGAWI
VTGGLREGVGCCVGEAVRDHAAAASSLSQKKVIAVGVAPWGLVHNREKLVNTQGSFPARY
YVQNASRDSCCLDNNYQAFLLVDDGSVGRRGGETAFRSKMEDYISHQRTGIWGSGSIEIP
VLCMLISGEAAMLKRVDLSLRKATPWLVLNGSGPAADLICELLDALSAVPMSCTSPPPEG
EGSESPSAELRERTRERVKRHFPAEADREKLVDRALSIYQNRDLITVFHGEQDSPDDFDT
VLLKALVRASKRVSSDASEYTEELKLAVAWNRVDIANSELFNGDIQWRYEDLEDSMTDAL
INNKPQFVRLFNENGLNILDYLTYQRLEGLYRSLSNSSLAYTLLQRRLTERQSLARSVPT
VPCTPDEPTPLKRPQSPMSPISGPSSAKELSLYEVSRLLWDILGDVCQPFYYSPLGLDQS
TSTWRTMKQVNKLLLGDCPYRKQRCVYPWASLFIWALLQNRSEMAVYFWEMAGESVLSAL
AGCKILRELSKLESETAAKLSMKELAQKFENLANDVFSECYQSSESRSFNLLIRQSLVWG
EATCLEMATAADARLFFGHDGLQSLLSQIWWGDMERSTEVWKLILTFFLPPLIYTNLISF
RDPEEEGKTEQVPHGQDTDSLDGVDATMFSLTDIMDEDAEENAAIRINLKGAPSSNPKRP
FILLRWREFWFAPVTAFLGNVLMYFLFLSLFAYVLLLDFKPPPPHGPSTLEFVLYFWVFT
LVCEEFRQTFFRGSTTLYQRMKLYIQDMWNKCDITAISLFALGMCCRMFPWSYEFGRTVM
AVDYMVFTLRLIHIFAIHKQLGPKIIIVEKMMKDVFFFLFFLAVWLMAYGVANQALLYSY
DPRPGWIFRRVFYRPYLHIFGHIPIHEMDADKLEEGIECTNNVTLIEAGAEPCTSTYANW
LVVILLVIFLLVTNILLVNLLIAMFSYTFSKVQEHSDTHWKFQRYNLIAEYHSRPCLAPP
FIILSHLHLFIKRHIRRIPSVKIKHFVLDIRGRQASRLNTWEAIQKENILSAQNKREREK
DSERLKRTSVKVDSVLKQMAEIRDHGHRLRMLETEVEYCSSALSWMAQALSQSNLIKPTR
PPPALRDLTLQLADPSLMENNEI
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgaccagagaagaggcgagagggagggggcaagagtgcgtaatgacggataaagagcat
gaaggaggcgacgggagaacgggaagaagaacatccgacaaagatcagagctggatcccc
aacatcatcaggaagagagtatgcaccacattcgtagaggactctttaagcaatggggca
ttgtgtcagtgtgggggcatgcgggagactcacggctccaacgctacgggagactatttc
ggagccgccatcgtcagccagtgggacagctcccagcactcctcagagtaccccaccgac
gccttcggagagctggaattcacaggggctggcaggagacacagccatttcttgcgtctg
tcatgcgacaccccacctcagatcgtgtacagtctgatgacggcccactggggggtgccc
tcccccaacctggtggtttctgttgtggggggtggggggtgtgagaaggtcaagacctgg
gtcagggaggtgctgagacaggggctggtcaaggcggcacagagaaccggggcgtggata
gtgacgggggggctgagggagggggtgggttgttgtgttggggaggcagtgcgagatcat
gcagcggcggcttcctccctctcccagaagaaagtcattgctgtgggcgtggccccctgg
gggctggtgcacaacagagagaagctagttaacacacagggtagtttcccagcgcggtat
tatgtccagaacgcatcccgtgactcgtgctgcctggataataactaccaggccttcctg
ctggtggatgatgggagtgtaggccggcggggaggggaaacggccttcaggtccaagatg
gaagactacatctcccaccagcgcaccggcatctggggtagtggcagtatagagattcct
gtgctgtgtatgctcatctcaggggaagctgccatgctgaagagggtggatctctctctg
aggaaggctactccctggctggtgttgaatggttctggtccagcggcagaccttatctgt
gagctgctggatgccttgtcagctgtgcccatgagctgcacctctcccccaccagagggt
gaggggagcgagagccccagcgcggagctgcgcgaaaggacccgtgagagggtcaagagg
cacttccctgccgaggcagaccgggagaagcttgtggacagggctctgagtatctatcag
aacagagatctgatcacagtgttccacggggagcaggacagtcctgatgattttgacact
gtgctactgaaggctctggtcagagccagtaaacgtgtgtccagtgacgccagtgagtac
acagaggagctgaagcttgcagtagcctggaacagggtggacatcgctaacagtgaactc
ttcaacggagacatccaatggaggtacgaggacctggaggactccatgacggacgcactg
atcaacaacaagccccagtttgtacgtctcttcaacgagaacggcctcaacatcctggac
tacctgacctaccagcgtctggagggcctgtaccgctcgctgtccaacagctctctggcc
tacacgcttctccagcgacgcctcacagagaggcagagcctggccagatctgtgcccact
gtcccctgcactccggacgagcctacacccctcaagaggccccagagccctatgagcccc
atatcaggaccctcctctgccaaagagctcagcttgtatgaggtgtcacggctactatgg
gacatcctgggagatgtgtgtcagcccttctactacagtcctctgggtttggaccagagc
accagcacctggagaacaatgaagcaagtgaataagttgttactgggggattgtccgtat
aggaagcagcgctgtgtctatccctgggcctctctgtttatctgggctctgctgcagaac
cgcagtgagatggctgtctacttctgggagatggcaggggagtctgtcctcagtgctctg
gcaggctgtaagattctgagggagctgtctaagcttgagagtgagacggcggccaagctc
tctatgaaggagctagcacagaagtttgagaacttggccaatgatgtgttcagtgaatgc
tatcagagcagtgagagtcgctctttcaacctccttataaggcagtctctggtgtggggc
gaagctacctgtctggagatggccaccgcagccgatgcccgcctcttcttcggtcacgat
ggcttgcagtctctgctgtctcagatctggtggggagacatggagaggagcacggaagtc
tggaaactgatcctcaccttcttcttaccccccctcatctacaccaacctcatcagcttc
agggatcctgaggaagaggggaagactgagcaggtgccccatggtcaagacacagacagt
ctggacggagtcgatgccaccatgttctccctcaccgacatcatggatgaggatgctgag
gaaaatgctgctataaggatcaatctgaaaggtgccccctcctccaatcctaagaggccc
tttatactgctacgctggagggagttctggtttgcgcccgtcacagcgtttctaggcaac
gtgctgatgtacttcctgttcctcagcctgtttgcttacgttctattgttggacttcaag
cccccgccccctcacggcccgtccaccttagagtttgttctctacttctgggtcttcacc
ctggtctgtgaggagtttcgacagacgttcttcaggggcagcactactttatatcagagg
atgaagctctacatccaggacatgtggaataagtgtgacatcacagccatctcactcttt
gcactgggcatgtgctgcagaatgttcccatggtcctatgagtttggccggactgtgatg
gctgtggactacatggtgtttaccctccgtctcatccacatattcgccatccacaaacag
ctgggacccaagatcatcatcgttgaaaaaatgatgaaggacgtcttcttcttcctcttc
ttcctggcggtgtggctcatggcctatggcgttgccaatcaggcactgctctactcctac
gatcctcgtcccggttggatcttccgccgagtgttctacaggccatacctgcacatattt
ggacatatccccattcatgaaatggatgctgataaactggaggaggggatagagtgcacc
aataacgtcaccctgatcgaggcaggggcagagccatgcacgagtacctatgctaactgg
ctggtggtcatcttattggtcatcttcctgctggtcaccaacatcctgctggtcaacctg
ctcattgccatgttcagttacacattctccaaagtgcaggagcacagcgacacccactgg
aagttccagcgctacaacttgattgcagagtaccactctagaccctgtctggctccaccc
ttcatcatcctctcccacctccacctcttcatcaagagacacatccgcaggatcccctct
gtcaagatcaaacactttgttctggatatccgtggcaggcaggccagtagactgaacaca
tgggaggccatccagaaggagaatatactgtctgcccagaacaaacgagagcgagagaaa
gactcagagagactcaaacgcacctctgtcaaggtggacagtgtcctaaagcagatggca
gagatccgggaccacggccacaggctcagaatgctggagacagaggtggagtactgttct
agtgccctctcctggatggcgcaggctctctctcagagtaacttgataaagcccacacgt
cctccacctgctctccgagatctaactctccaactagctgacccaagtctgatggagaat
aatgaaatctag
DBGET
integrated database retrieval system
