Salmo trutta (river trout): 115171827
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Entry
115171827 CDS
T08542
Name
(RefSeq) actin, non-muscle 6.2
KO
K05692
actin beta/gamma 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
stru04145
Phagosome
stru04210
Apoptosis
stru04510
Focal adhesion
stru04520
Adherens junction
stru04530
Tight junction
stru04810
Regulation of actin cytoskeleton
stru04814
Motor proteins
stru04820
Cytoskeleton in muscle cells
stru05100
Bacterial invasion of epithelial cells
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115171827
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115171827
09143 Cell growth and death
04210 Apoptosis
115171827
09144 Cellular community - eukaryotes
04510 Focal adhesion
115171827
04520 Adherens junction
115171827
04530 Tight junction
115171827
09142 Cell motility
04814 Motor proteins
115171827
04820 Cytoskeleton in muscle cells
115171827
04810 Regulation of actin cytoskeleton
115171827
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115171827
05100 Bacterial invasion of epithelial cells
115171827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115171827
03019 Messenger RNA biogenesis [BR:
stru03019
]
115171827
03036 Chromosome and associated proteins [BR:
stru03036
]
115171827
03029 Mitochondrial biogenesis [BR:
stru03029
]
115171827
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115171827
04147 Exosome [BR:
stru04147
]
115171827
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115171827
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
115171827
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
115171827
NuA4 complex
115171827
Chromatin remodeling factors
BAF complex
115171827
PBAF complex
115171827
GBAF(ncBAF) complex
115171827
SWR1 complex
115171827
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
115171827
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
115171827
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115171827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
115171827
NCBI-ProteinID:
XP_029584857
Ensembl:
ENSSTUG00000045086
UniProt:
A0A674DYS0
LinkDB
All DBs
Position
32:37679174..37683765
Genome browser
AA seq
376 aa
AA seq
DB search
MAEDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVGIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMKTSASSSSLEKS
YELPDGQVITIGNERFRCPETMFQPSFIGMESTGVHETTYNSIMKCDVDIRKDLYANTVL
SGGTTMFPGIADRMQKEISGLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYEESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatgatattgctgcactggtggttgacaatggttcaggcatgtgcaaggct
ggttttgcaggggatgatgctccccgtgctgtcttcccctcaattgttggaagacccaga
catcagggtgtgatggtgggcatgggacagaaggacagctacgtgggagatgaggcccag
agcaagagaggcatcctgactctgaagtaccccatcgagcacggcattgttaccaactgg
gacgacatggagaagatctggcatcacaccttctacaatgagctgcgtgtggcccctgaa
gagcatcccgtcctgctcacggaggccccacttaaccccaaagccaacagggagaagatg
acccagatcatgtttgagaccttcaacagcccagccatgtatgtaggtatccaggccgtg
ctgtctttgtacgcatctggtcgcaccacaggaatagtgatggattccggggatggcgtt
agccacacggtgcccatctacgagggctacgctcttccccacgccatcctgcgtctggac
ctggccggacgtgacctcacggactacctgatgaagatcctgactgagcgtggctacagc
ttcaccaccacggccgagagggagattgtgcgcgacatcaaggagaagctggcctatgtg
gcgctggacttcgagcaggagatgaagacctccgcctccagttcctctctggagaagagc
tacgagctgcctgatggacaggtcatcactatcggcaacgagcgcttccggtgccctgag
accatgttccagccgtccttcattggaatggaaagcactggagtgcacgagaccacctac
aactctatcatgaagtgtgatgtggacatcaggaaagacctgtatgccaacactgttctc
tctggtggaaccaccatgttccctggcatcgctgatagaatgcagaaggagatcagtggc
ttggcaccccctactatgaagattaagatcattgcccctcctgagcgtaaatactctgtg
tggatcggtggctccatcctggcctctctctccaccttccaacagatgtggatttccaag
caggaatacgaggaatccggcccatctatcgtccaccgcaaatgtttctaa
DBGET
integrated database retrieval system