KEGG   Salmo trutta (river trout): 115171988
Entry
115171988         CDS       T08542                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115171988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:stru03000]
    115171988
   04121 Ubiquitin system [BR:stru04121]
    115171988
   03036 Chromosome and associated proteins [BR:stru03036]
    115171988
Enzymes [BR:stru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     115171988
Transcription factors [BR:stru03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    115171988
Ubiquitin system [BR:stru04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115171988
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115171988
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     115171988
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like SR-25 JmjC F-box Cupin_8
Other DBs
NCBI-GeneID: 115171988
NCBI-ProteinID: XP_029585098
Ensembl: ENSSTUG00000017720
LinkDB
Position
3:28601992..28613969
AA seq 1338 aa
MEDQNPRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLQSDRFNSYLVKHMDGKDF
TFEYIQREGLRDPIVFEKKDGLGLEMPDSDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MAQWRRYYETPPSERDKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPDFQKHSLGVG
LTREDSENKLNGHVKNGTEEKKEGDDDEEEKEEESETKVKMEESEDDSFPLPGATKPEVR
VNLTPLELEGLWNLLGKLEELPAHKKCVPAGIRNAPALLHDIRALLEEHCNDDPKLSYTG
KPIVKWPKRPSWYQPPPPSVVYRPRLAMPHKAVVPRRAKPTSISALRRRRVRCKHCAACQ
RKECGECNFCKDMRRFGGPGRMKKGCMMRQCLAPGLPNSAVCALCGAGQGKQECSDASPS
STTLMECSNCAQIAHPDCIKVPGVGRINKDLPSCWECPKCYQGKEGPSSESSSSDEDSTA
STGSLSTSNHVHREGLGDGEAGGGMRKGRRGRPPLTSSLSQRRAPPPSQRLLLQQQQNRK
RAGALELRLRKRIKLERSKILQSKQMLSLERSSKLLCSQGLAHLQRGVSSRLRSPVGRLS
RGRGSFRGSSYRSPTGARLQPPQPSLSLAPAGRGEGHRERGSGRGVRLRGAAAGRGRRGQ
RHGGAEEESDSSSSSSSTSSSSSSSSSSSSSSDEERENGVRTRRNKENRPQRRGSGAAKE
DEEESEESNQNGEEMDEDGREGGQAQTEPPVLVVSDLSDDLMKGSYLTVTLQPSRAKRDP
GAIVPKLEAAVAPRPAPPGQSCIQRKNLARPPLRNHAPDPYAAPSHSDTHTHTRGSSTHT
RGSHPDERRMRPGRPERTDNSASSSSPVPLRLPLSALQDGGREVANGGSEPGCEREVWVS
VFRYLTRTELCVCMAVCKNWHKWSLDKRLWMRIDLSVSKSISPQALSGIIKRQPVTLDLS
WTSISKKQLTWLINRLPGLKDLMLSGCSWSSISALSSPSCPLLRTLDLRWADGIKDGQIR
DLLNPPGCDNRSQLRNMQSFRLAGLEISDCTLRLVIRHMPLLTRLDLSHCGGLTDQSINL
LTAVGSSTRNTLTELNLGGCSKLTDSCLRYLRRLSCLSLLDLRECKGVSRKACEAFISEL
SVNTLYCLSEDKLIQRIS
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggaagaccaaaaccctcgttacagcaagcgcttgcgtacggggacgcggcggcgctac
caggatgacgggatctcggacgatgagattgaggggaagaggacgtttgacctggatgag
aagctgcagagtgacaggttcaactcctacctggttaaacacatggatggaaaagacttc
acattcgagtacatccagagggaggggctgagagaccctatcgtctttgagaaaaaagat
ggcctcggcttagagatgccagactctgatttcagtgtgagtgatgtcaagctgtttgta
ggcagtcggcggatggttgacgttatggatgtgaccactcagaagggcatcgagatgtcc
atggcccaatggcggcggtactacgagaccccgccctcggagcgagataagctctataac
gtcatcagcctggagttcagtcacaccaagctggagaacctggtgaaacgacccgcctcg
gtggatttgatagactgggtggacaacatgtggccaaggcatctaaaggagagacagaga
gactcaaccaactccataatagaaatgcagtatcccaaagtgcagaagtactgtctgatg
agtgtccagggctgcttcacagacttccacgttgactttggcggaacgtcggtctggtac
cacatcctgcgggggggaaaggtgttctggctgatcccgcccacaccccagaacttggag
ctgtatgagaactgggtgttgtcagggaaacagggagacattttcctgggggacaaggcc
caggactgtcagaggatagaactgaagcagggatacaccttcatgatcccctctggctgg
atccatgctgtgtacacccctgaggacacactggtgtttggaggaaacttcctccacagc
ttcaacatccccatgcagctcaacatctacaacattgaggaccgcacacgagtcccggct
aagttccgataccccttctactatgagatgtgctggtacgtgttggaaagatacctctac
tgcctgaccaacacctcccacctcacccccgacttccagaagcactcgcttggtgttggt
ctgacccgtgaagactcggagaacaaactcaacggccacgtgaaaaacggcacagaggaa
aagaaagagggagacgatgatgaggaagaaaaggaggaggaaagtgagaccaaggtcaaa
atggaagagtctgaggacgattccttcccccttcctggtgccactaagccggaggtgaga
gtaaacctgactcccctggagctggaggggctgtggaacctgctggggaagctggaggag
ctgccggcccacaaaaagtgtgtccccgcaggcatccgtaatgcccccgccctgctccat
gacatacgggctcttctggaggaacactgcaacgatgaccccaagctgtcttacaccgga
aagcccatcgtcaagtggcccaagaggccctcgtggtaccagccccctcccccctcagtg
gtataccgtcctcgtctcgccatgccccacaaggccgtggtccctcgccgtgccaagccc
acctctatctcggctctgagacggaggcgcgtgcgctgcaaacactgtgcagcctgccag
aggaaggagtgcggcgaatgcaacttctgcaaagatatgaggaggttcggaggacccggg
cgcatgaagaagggctgcatgatgcggcagtgtctcgctcctggcctgcctaactcagcg
gtgtgtgctctgtgtggagcgggccaggggaagcaggagtgttcagacgcaagcccctcc
tccacaaccctcatggaatgctccaactgtgctcagattgcccaccccgactgcatcaag
gttcctggggtgggcaggatcaacaaggacctgcccagctgctgggagtgtcccaaatgt
taccagggcaaagaaggcccctcatcggagtcatccagtagtgatgaggacagcacggcg
tctacaggttctctctctacgtcaaatcatgtccaccgagaggggttaggagatggggag
gcaggcggtgggatgaggaagggacgacgcggcagaccccccctgacgtcctctctgtcc
cagcggagagcgccccctccctctcagcggctgttactgcagcaacaacaaaacaggaag
agagctggagcgctggagttaagactcaggaagaggatcaaactggagcgcagcaaaatc
ttacaatcgaagcagatgttgtctctggagcgttcttctaagctcctgtgctcccagggt
ctagcccacctccagagaggggtgtcttctcgcctccgctcccctgttggcagactgtcc
cggggccgtgggtccttcagaggctcctcttaccgctcccctacaggggctcgcctgcag
cccccccaaccctccctcagcctggcccccgcaggcaggggagaggggcacagggagcga
gggagtgggagaggagtacggctcagaggagcagcagcagggagaggaagaagaggacag
agacacggaggagcagaggaagagagtgatagcagcagtagtagcagcagcaccagcagc
agcagcagcagcagtagtagtagtagtagtagtagtgatgaggagagggagaacggcgtg
cggaccagacggaacaaagagaaccgaccacagagacgaggaagcggagcagccaaagaa
gatgaggaagagagtgaggagtccaaccaaaacggagaagagatggatgaagacgggagg
gaaggaggacaggcacagacggagccaccggtcctcgtagtgtcggaccttagcgacgac
ctcatgaagggctcgtatctcacagtaaccctacagccgtcgagggccaaacgtgatccg
ggggccattgtcccgaaactggaggctgcagtcgccccccgccctgcccctcctggccag
agttgcatccaacgcaagaacctggcccgaccacccctcaggaaccacgccccagaccct
tacgctgcaccctcgcactcagacacacacacacacacccggggcagcagtacacacaca
cggggctcccatccagacgagaggagaatgaggccaggcagaccagagagaacagacaac
agtgcttcctcctcctctcctgttcctctacgcctccctctgtcggctttacaggatggg
gggagggaggtggcgaatggagggagcgagccgggctgtgagagggaggtgtgggtatct
gtcttccgctacctgactcgtaccgagctctgtgtctgcatggctgtctgcaagaactgg
cacaaatggagcttggataagaggctgtggatgcggatcgatctgagcgtgtctaaatcc
atcagtcctcaggctctgtcaggtattatcaaacgccaaccagtcaccctggacctctcc
tggacctccatctccaagaaacaactcacctggctcatcaaccgcctgcctgggttgaag
gatctcatgttgtctggctgttcctggtcttcaatttcggctcttagctcgcccagttgc
cccctcctgcgcacgctggaccttcggtgggccgacgggatcaaagacggacagattagg
gacctgctcaacccaccaggttgtgataaccgcagtcagctgaggaacatgcagtctttc
cgtctggcggggctggagatcagtgactgtactctgaggctggtgatcagacacatgccc
ctgctgacccgtctggacctgtcccactgtggaggcctcactgaccagtccatcaacctg
ctcactgctgtgggctcctccacacgcaacacactcaccgagctcaacctggggggctgc
agtaagctgacagactcgtgtctgcggtacctccgccggctttcctgcctctccctgctg
gacctgcgggaatgcaagggtgtgtcccgcaaagcctgcgaggccttcatctctgagctg
tctgtcaacaccctctactgcctatctgaagacaaactgatccagaggatatcctag

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