Salmo trutta (river trout): 115172380
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Entry
115172380 CDS
T08542
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115172380
04621 NOD-like receptor signaling pathway
115172380
04622 RIG-I-like receptor signaling pathway
115172380
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115172380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Crescentin
DUF4559
zf-TRAF_2
Sina_ZnF
BLOC1_2
zf-RING_UBOX
DUF1664
CALCOCO1
TolA_bind_tri
FapA
Snapin_Pallidin
Fez1
Spc7
Motif
Other DBs
NCBI-GeneID:
115172380
NCBI-ProteinID:
XP_029585628
Ensembl:
ENSSTUG00000024386
LinkDB
All DBs
Position
33:complement(10690019..10705535)
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AA seq
573 aa
AA seq
DB search
MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISEQLSKPNPVCPEDKEPLFKDKVFRDVCCNREIM
ALRVYCRSEKNGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAQVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSQYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgagcagctaagcaaaccgaatccagtatgtcctgaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgcaatagagagatcatg
gctctgagagtgtactgcaggagtgagaagaacggctgtaaggagcagataagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgaattacagaaacac
aaagacaccgtttgtccttcatttccggtggcttgccccaatcattgtactttcccctcc
atcttacggagcaaactgacaagtcatcaacatgagtgtccaaaggctcaggtcacctgc
tcctttatccgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccaggaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccaggcctgagc
agccgtctgtctgaaacattgtctcagtacgaggagatgagggagaagaatagacagctg
gaccagaagctcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtagagaccctccgagga
actgtggagagcatccgctccagagtcgccactctagaaggaggacggggcggggccaat
ccagccacacacacactagagacacagctctcccgtcacgatgacatgctgagcgtccat
gagatccgcctagcagacatggacctgcgcttccaggtcctagagacggcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggtgacggcatggggaaaggaacccacctgtctctgttcttc
gtggtgatgcgtggcgagtacgacgccctgctgccctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccaggaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcgggctgcccg
ctgttcgtggcccagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga
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