Salmo trutta (river trout): 115172480
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Entry
115172480 CDS
T08542
Name
(RefSeq) guanine nucleotide exchange C9orf72
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
stru
Salmo trutta (river trout)
Pathway
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115172480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115172480
Membrane trafficking [BR:
stru04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
115172480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
115172480
NCBI-ProteinID:
XP_029585812
LinkDB
All DBs
Position
33:16108612..16115400
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AA seq
460 aa
AA seq
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MSSGPPQSPTVAKTEVTVEGECPIFAATFAYWDNILGPRVCHIWAPRCEQPLLLSDGEVT
FLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIISLIFDGELKGDKNTCALSIILPQTE
LAFYLPLHMVCVERLKHIIRKGRIWMQKGYNIISVLSSEIVPVMELLSSMKTHSVPEDID
IKDTILNDDDIGDSCHEDFLHKAITSHLQTCGCSMVVGSNPDKVNKIVRTLCLFLTPAER
KCSRFCKADSTFKYDTGLFVQGLLKDSMGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPP
CHEHTYIQRRYMRSELSVLWKVASEEDVDTDTGIHTESFTPDLHVFQDVMHEDTLVKSFI
DEVFMLKPGLNLRSTYLAQFLLILHRKALSLLKYIEDETQKGKKPFRSLRSLKTDLDLMV
EGDLNIIMALAEKQRAGLHSFVFGKQFYTSVHEGDVLMSF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggcccacctcagtcgcccacagtggctaagacagaggtgactgttgaagga
gaatgccctatcttcgctgccacctttgcctactgggacaacatcctggggccgcgggtg
tgtcacatctgggctcccaggtgcgagcaaccactgttgctgagcgatggcgaagtcacc
ttcctggccaatcacacactgaacggggagattctgcgcagcgcagagtgcggcgccgtg
gacgtcaagttcttcgtcctagccgagaagggtgtcatcatcatctcgctcatcttcgat
ggcgagctgaagggtgacaagaacacctgtgccctgtccatcatcctgccgcagacagag
ctggccttctacctgcccttgcacatggtctgtgtggagaggctcaaacacataatccgc
aagggacgcatctggatgcagaagggctacaacataatttctgtgctgtcatcagagatt
gtccccgtcatggagctgctgtcatccatgaagacacacagtgtcccagaggacatagac
atcaaggacaccatcctaaatgacgatgacatcggagacagctgtcatgaagatttcctg
cacaaggcaatcacttctcatctccaaacctgtggctgctccatggtggtcggaagcaac
ccagacaaagtcaacaagatagtgcgcacgctgtgcctcttcctcacccctgctgagagg
aagtgctctcggttctgtaaagctgactctactttcaagtatgatacaggactgtttgta
caaggcctcctcaaggactccatgggcagttttgtcttacccttccgccaggtgctgtac
tcgccctacccgactacgcacatcgacgtggacatcaacacggtgaagcagatgccgccc
tgccacgagcacacatacattcagcggcgctacatgcgctcagagctcagcgtgctctgg
aaggtggccagtgaagaggacgtcgacactgacaccggcatccacaccgagtccttcacc
cccgacctacatgtatttcaggacgttatgcatgaagacaccctggtaaagtcatttata
gatgaggtgttcatgctgaagccaggtctcaatctgcgaagtacttacttggcccagttc
ttgctgatccttcacaggaaggcgctctcactactcaaatacatcgaagatgagacgcaa
aagggaaagaagcctttccgctccttgcgcagcttgaagacagacctcgacctgatggtg
gaaggcgacctgaatatcatcatggcgttggctgaaaagcagagggctggactgcactcc
tttgtatttgggaagcaattctacaccagtgtacatgagggagatgtgctcatgagcttt
tga
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