Salmo trutta (river trout): 115173045
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Entry
115173045 CDS
T08542
Name
(RefSeq) calphotin-like
KO
K12648
mitochondrial antiviral-signaling protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115173045
04622 RIG-I-like receptor signaling pathway
115173045
04623 Cytosolic DNA-sensing pathway
115173045
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115173045
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Gene cluster
GFIT
Motif
Pfam:
CARD_2
Motif
Other DBs
NCBI-GeneID:
115173045
NCBI-ProteinID:
XP_029586882
Ensembl:
ENSSTUG00000038812
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Position
33:complement(43567791..43580101)
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AA seq
616 aa
AA seq
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MSSFTREKLSLHLRRRMGVFVTRVKATELIAHLPCLTPSDKEEIQAKKDFSGNYVAMQLL
LDYVQKRMNWPEELMSALELLEHQDLADELRAEWNKHNQNNPYPPSAAATTAVRTPVHPI
PSTISEGSPSSLVLPAQPAPPEVAAPLEVAPPEASLPLPPPVVAPQPEAPPSSVPEAPMA
GSSSEPAPHAPEAAVSPEMASEAAPSPVAVLKAEPQATPLSPVSAEEPTVISEPSASSQP
GPVETVSLEDNSSHSDAPTQIALSETTPTSSGSDLIPAVTQIPLPVSHLALSQTESTPAA
LARFQSPERRPVQDTLPHTVKVTTFHQEAVEDSDPTQVTEDVQHTELSHFSLATASASPT
VDTSMNEDDVNFSKPEVLRSEVMDSQPYSGDSTRLQRSVSDLVLATDDVNSPVVVPDPFT
TSTHLPCQENGVPEEINEPLSHNEPQEDTFESSWLSSLGDQEVLHNVVHVSEDASIQNND
GQSPNIVVHVSKEPRIWNQDDQTQSMLGTKNVGVSGTPRPVPNRNGQSQGLIMMVNGQDA
SPSTKHPDAPTGSVAVVNSSSSAENRKTVEPMGTEVPMEARAVPELKQEGTIGESYYLLG
AAVVAVSLFMAWRMMN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcacccgggaaaaactgtctttgcacctgcggcgcagaatgggggtgttt
gtgaccagagtgaaggccaccgagctcatagcccatctcccttgccttacaccttctgac
aaggaggagatccaggccaagaaggacttttctggtaactatgtggcgatgcaactcctg
ctggactatgtgcagaagagaatgaactggccagaagagttgatgtcagccctggagctg
ctggagcatcaggacctggctgatgaactgagggcagagtggaacaagcataaccagaat
aatccctaccctccttcagctgctgctaccactgcagtcaggactcctgttcatccaatt
ccttctaccatctctgaggggtcgccatcttctctggtcctcccagctcagccagcccca
ccggaggtagctgccccactggaggtagccccaccggaggcttcactccctttgccccct
cctgtagtggctccccagccagaagcgcccccaagctcagttcctgaggctcccatggct
ggctcctcttcagagccagccccacatgctcccgaagcagcagtgagccctgaaatggcc
tcagaggcagcaccttctcctgtcgctgtccttaaggcagagccccaggcaacccctctg
tctcctgtctcagcagaggagcccacagtgatctctgaaccttcagcctcatcccagcct
ggtcctgttgaaaccgtcagtctggaggacaactcgtctcatagtgatgctccaacacag
atagccctgtctgaaaccactcctacctcgtctggttcagacctaatcccagctgtaact
caaatcccattgcctgtctcacacctagccctgtcccaaactgaatccacccctgctgcc
ttggccagattccagtcccctgagagacgtccagttcaggacaccttgccacacacagtc
aaagtgactaccttccaccaggaagctgtagaggactctgatccaacccaggtaactgaa
gatgtccaacacactgagctgtctcacttctccctggccacggcctcagcctcacccacg
gtggatacctccatgaacgaggatgatgtgaactttagcaagcctgaagtcctccgcagt
gaggtcatggacagccagccatactcaggagactcgacacgtctacagaggtctgtgtca
gacctggtacttgctacagatgacgtgaacagtcctgttgtggtcccagaccccttcact
acttccacccatctgccgtgtcaggagaatggagttcctgaagaaataaacgaacccctg
tcccataacgagccccaagaggacaccttcgagtcctcctggctgagctccctgggggac
caggaggtgctgcacaatgttgttcacgtgtctgaggacgcgtccatccagaacaacgac
ggccagtcgccgaacattgtagtccacgtgtccaaggagccacgtatctggaatcaagat
gaccaaacacagagcatgctgggtactaagaatgtgggtgtgtctggaacaccgagacca
gttccgaaccgcaacggccaatctcagggtctgattatgatggttaacggccaagacgcc
agcccttcaaccaaacatcctgatgctcctactggctctgtcgccgtcgtcaacagctct
tcctcggctgagaaccgtaagaccgtggagcctatggggacggaggtcccgatggaggct
agagctgttcctgaactgaagcaggagggaacaataggagagagctactatcttctgggg
gctgctgtagtggccgtctcactgttcatggcctggaggatgatgaattaa
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