Salmo trutta (river trout): 115174125
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Entry
115174125 CDS
T08542
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04060
Cytokine-cytokine receptor interaction
stru04150
mTOR signaling pathway
stru04210
Apoptosis
stru04217
Necroptosis
stru04350
TGF-beta signaling pathway
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04625
C-type lectin receptor signaling pathway
stru04920
Adipocytokine signaling pathway
stru05132
Salmonella infection
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115174125
04350 TGF-beta signaling pathway
115174125
04150 mTOR signaling pathway
115174125
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115174125
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115174125
04217 Necroptosis
115174125
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115174125
04621 NOD-like receptor signaling pathway
115174125
04622 RIG-I-like receptor signaling pathway
115174125
04625 C-type lectin receptor signaling pathway
115174125
09152 Endocrine system
04920 Adipocytokine signaling pathway
115174125
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115174125
09171 Infectious disease: bacterial
05132 Salmonella infection
115174125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115174125
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115174125
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Tumor necrosis fators
115174125
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Cytokines
115174125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
NTF2_YvbJ
Motif
Other DBs
NCBI-GeneID:
115174125
NCBI-ProteinID:
XP_029588675
Ensembl:
ENSSTUG00000015618
UniProt:
A0A673YQF2
LinkDB
All DBs
Position
34:complement(37556802..37559994)
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AA seq
244 aa
AA seq
DB search
MEGDCSRVMVDMESGPVYPATTVTLVREKSSHRWRLCGALLAIALCVSAALFITRHGKKQ
DHVEEVDELQHTLRQLSGNIKAAIHLEGEYNSSGKYKTAVEWTDDEGQGFSQGGLKLNNN
EIVIPQTGLYFVYSQVSFHVSCKVNPKHPNNQEMVHLSNTVKRWSPSYGSADSKEYQTLL
NSVRTVCKKSSNSEASEGKWYNAVYMGAVFNLEKGDQLRTVTENRLLPHLENGAGKNFFG
VFAL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgattgcagcagagtgatggtagacatggagagtggccctgtgtacccagca
acgaccgtgaccctggtacgggaaaagtcctcacaccggtggaggctgtgtggtgccctg
ctggccattgcactgtgtgtctcagctgcgctcttcattacccggcacggcaagaaacaa
gatcacgtcgaggaagttgatgaacttcagcatacattgagacaactctctggaaacata
aaggctgccattcatttagaaggtgaatacaacagcagtggaaaatacaagaccgcagtg
gagtggacagacgacgagggccagggattctcacaggggggtcttaaactcaacaacaac
gagattgtgatcccccagacgggcctatacttcgtctatagccaggtctctttccacgtc
agttgcaaggtcaacccaaagcatcctaacaaccaggagatggttcacctgagtaacacg
gtcaagcgctggtccccaagctacggcagcgctgacagcaaggagtaccagacgctgctc
aactccgtacgcaccgtgtgtaagaagtcgtccaacagcgaggcgagcgaaggaaagtgg
tataatgcagtgtacatgggagcagtgttcaacctggagaaaggagaccagctccggaca
gtcacagagaacaggcttttgccacatctggagaatggtgctgggaagaacttttttggc
gtgttcgccttgtga
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