Salmo trutta (river trout): 115174164
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Entry
115174164 CDS
T08542
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04510
Focal adhesion
stru04518
Integrin signaling
stru04519
Cadherin signaling
stru04540
Gap junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115174164 (pdgfrb)
04020 Calcium signaling pathway
115174164 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
115174164 (pdgfrb)
04519 Cadherin signaling
115174164 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115174164 (pdgfrb)
04540 Gap junction
115174164 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115174164 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115174164 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115174164 (pdgfrb)
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115174164 (pdgfrb)
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115174164 (pdgfrb)
CD molecules [BR:
stru04090
]
Proteins
115174164 (pdgfrb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
VEGFR1-3_N_Ig-like
Ig_2
ig
Ig_VEGFR-1-like_5th
V-set
C2-set_2
RIFIN
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
115174164
NCBI-ProteinID:
XP_029588727
UniProt:
A0A673WYX3
LinkDB
All DBs
Position
3:35108726..35168020
Genome browser
AA seq
1096 aa
AA seq
DB search
MRSVRVCTLHLTTILTALLHFCPEFCCLEISPSNSEVVMAAGDSMIITCTGWGTVEWRFK
RDDNVPYFGVENQNTTSVLILDNVTWSQTGVYVCAETWTDKTIEVAVFVPDPDVWFIESF
HGMVTKTSEEGIIPCVVTNPQINVTLYERDSDMHLKGVYIPSEGYRAPLEDRTYVCRGEL
NGEEKESQAFYVFSIVVPETIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSWDYPNRD
VDSIEPLTDVLSSQKMRSRLIVSKVTLANTGQYACHVHEGVLDQRATANVNITILEQGFV
ELRSIQDRNVSAQLHQNVELRVEIEAYPPPRVRWTKDDATVNGDKVVVTTQEHETRYVST
LTLVRIRTEQKGLYTVHVANGDDTKKLTFDLEVKVPPQITDLSDHHLPGKRHAVTCVAEG
VPSPTIQWFSCDSMLKCSNRSTVWQPLVSDPETLSVQTNVSFNESRKVGQVRSQVIFHKP
QQVSVRCEASNERGLRRRDVKLVSSTFFSQVAVLAAVLALVVIVIISIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYG
LGHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHKNKHTFLQYYLEKNQEDSGCRISGGSTPLSQRKGYVSFGSECDGGYM
DMSKDEPTVYVPMQELKDTIKYADIQASPYESPYQHDHYQEQDQTIMDPALFISDSTTLS
YADLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYIS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKR
GYRMAKPNHATDEVYEVMQKCWDEKHEKRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
SDHPAVVRTKPRLSSPFPTPAITPSTAPDTLQDLNPYPLTGDFRPETDGEEVTTSYNDYI
IPIPDPKPQEEVFSEANSMPMESPVSSLALEDDEADSISQETAEADTIPEEEDLHANQAL
IPLESSGTPEVEDSFL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgtcagagtatgcactctccatctgacaaccattcttacagctcttttacac
ttctgtcctgagttctgttgcctggagatctcccctagcaacagtgaagtcgtcatggca
gcgggtgactccatgatcattacctgtaccggctgggggacggtcgaatggaggttcaag
cgggatgacaacgttccctattttggagtggagaaccagaacacgaccagtgttctcatt
ctggacaatgtgacatggagccaaacgggggtatatgtctgtgccgagacttggactgac
aagactatagaggtggcagtctttgtgccagaccctgatgtgtggttcattgagagtttc
cacggcatggtgactaagaccagcgaggaggggatcatcccgtgtgtggtcaccaacccc
cagatcaacgtcaccctctacgaaagagacagtgacatgcacctgaagggggtctacatc
ccaagtgagggctacagggcgcccctggaggacaggacctatgtgtgccgaggagagctg
aacggggaggagaaagagtcccaggctttctacgtcttcagcattgttgttccggagacg
atcgacgcctacatcaatgcgtctaagacggtgctgaagcagggcgagcctcttacagtg
aactgcacggtgcacggagtggagctggtcttcttctcctgggactatcccaatagagac
gtggactccattgagcctctgactgacgtcctgtcatcccagaagatgcgctcacgcctc
atagtctccaaggtgacgctggccaacacaggccagtatgcgtgtcatgtccacgagggt
gtcctggaccagagagccacagccaacgtcaacatcaccatccttgaacaaggcttcgtg
gagctgaggtccatccaggatcgtaatgtctcagcccagctgcaccagaacgtagagctg
agggtggagattgaagcttacccccctccacgtgtccgctggaccaaagatgatgccacg
gtcaacggggacaaagtcgtagtcaccacgcaggagcatgagaccaggtacgtcagcacg
ttgaccctggtgaggatcaggacagaacagaaaggcctctacaccgttcacgtcgccaac
ggagatgacaccaagaaattgacctttgatctagaggtcaaagtcccccctcagatcaca
gacctgtcagaccaccacctccctgggaagaggcatgcagtgacctgtgtggctgagggg
gtaccttcccccaccatccagtggttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctagtgtcagaccccgagaccctgagcgtccagaccaacgtc
agcttcaacgagagccgtaaggtgggccaggtccgcagccaggtcatcttccacaagccc
cagcaggtgagcgtccgctgcgaggctagcaacgagagaggactccgcaggagggacgtc
aaactggtgtccagcacttttttctcccaggtggcagtgttggctgcggttctagccctg
gtagtcatcgtcatcatctccatcatcatcctcatcgctgtgtggaggaagaagcctcgc
tatgagatcaggtggaaggtgatcgagtcagtgagtctggacggacatgagtacatctac
gttgaccccatccatctgccctatgaccttgcctgggagatgccccgagacagcctggtg
ctgggtcgtactcttgggtccggagcattcggcagggtggtcgaagcaaccgcgtatggt
ctcggtcattcccagtccagcacgaaagtggcagtgaaaatgctcaaatccacggccagg
aggagtgagacccaggctctaatgtcagagctgaagatcatgagccacctggggcctcac
ctcaacattgtcaacctgctgggggcctgcaccaaacagggccctctctacctggtgaca
gagtactgtcgctatggagacctggtggactacttacacaagaacaagcacacgttcctg
cagtactaccttgaaaagaaccaggaggactctggctgccgcatctctggagggagcact
cctctcagccagaggaaaggctacgtgtcatttggcagtgagtgtgacggtggttacatg
gacatgagtaaggacgagcccacagtgtacgtccccatgcaggagctgaaagacaccatc
aaatacgctgacatccaggcttctccctatgagtctccctatcagcacgaccattaccag
gaacaagaccagaccataatggaccctgccctgttcatcagtgactctaccaccctcagc
tatgctgacctcatcggcttcagctaccaggtggccaaaggcatggagttcctcgcctcc
aagaactgtgtccatcgtgacctggccgccaggaacgtgttgatctgtgaggggaaactg
gtgaagatctgtgactttggcctagccagagacatcatgcacgattccaactacatctcc
aaaggcagtacattcctgcccctgaagtggatggccccagagagtatcttccataacctg
tacaccaccctgagtgacgtgtggtcctacggcatcttgctctgggagatcttcaccctt
ggaggaaccccttaccctgaccttcccatgaatgagctgttttacagtgccttaaagaga
ggctatcgcatggccaaacctaaccatgccacagacgaagtttatgaagtgatgcagaaa
tgctgggatgagaagcatgagaagaggccagagttctcctttctggtgcacaccatgggg
aacatgctcactgacagctataaaaagagatactgccaagtcaacgacgagttcttcaag
agtgaccacccagccgtggtccgaaccaaacccaggctctcctctcccttccccacccca
gccatcaccccctccaccgcccctgacaccctccaggacctcaacccctaccccctaact
ggagactttagaccagagacagatggagaggaagtgacaacctcctacaacgactacatc
attcccatcccggaccccaagcctcaggaggaagtcttctccgaggccaacagcatgcca
atggaaagccccgtgagctctctggctctggaggatgatgaggctgactccatctcccag
gagacagcagaggcagacaccattccagaagaggaggatctccatgccaaccaggctctg
attccactggaatcttctggaacaccggaagtggaagacagcttcctgtag
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