Salmo trutta (river trout): 115174164
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Entry
115174164 CDS
T08542
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
stru04510
Focal adhesion
stru04540
Gap junction
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115174164
04020 Calcium signaling pathway
115174164
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115174164
04540 Gap junction
115174164
09142 Cell motility
04810 Regulation of actin cytoskeleton
115174164
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
stru01001
]
115174164
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115174164
Enzymes [BR:
stru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115174164
Protein kinases [BR:
stru01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115174164
CD molecules [BR:
stru04090
]
Proteins
115174164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
RIFIN
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
115174164
NCBI-ProteinID:
XP_029588727
Ensembl:
ENSSTUG00000006606
LinkDB
All DBs
Position
3:35108726..35168020
Genome browser
AA seq
1096 aa
AA seq
DB search
MRSVRVCTLHLTTILTALLHFCPEFCCLEISPSNSEVVMAAGDSMIITCTGWGTVEWRFK
RDDNVPYFGVENQNTTSVLILDNVTWSQTGVYVCAETWTDKTIEVAVFVPDPDVWFIESF
HGMVTKTSEEGIIPCVVTNPQINVTLYERDSDMHLKGVYIPSEGYRAPLEDRTYVCRGEL
NGEEKESQAFYVFSIVVPETIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSWDYPNRD
VDSIEPLTDVLSSQKMRSRLIVSKVTLANTGQYACHVHEGVLDQRATANVNITILEQGFV
ELRSIQDRNVSAQLHQNVELRVEIEAYPPPRVRWTKDDATVNGDKVVVTTQEHETRYVST
LTLVRIRTEQKGLYTVHVANGDDTKKLTFDLEVKVPPQITDLSDHHLPGKRHAVTCVAEG
VPSPTIQWFSCDSMLKCSNRSTVWQPLVSDPETLSVQTNVSFNESRKVGQVRSQVIFHKP
QQVSVRCEASNERGLRRRDVKLVSSTFFSQVAVLAAVLALVVIVIISIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYG
LGHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHKNKHTFLQYYLEKNQEDSGCRISGGSTPLSQRKGYVSFGSECDGGYM
DMSKDEPTVYVPMQELKDTIKYADIQASPYESPYQHDHYQEQDQTIMDPALFISDSTTLS
YADLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYIS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKR
GYRMAKPNHATDEVYEVMQKCWDEKHEKRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
SDHPAVVRTKPRLSSPFPTPAITPSTAPDTLQDLNPYPLTGDFRPETDGEEVTTSYNDYI
IPIPDPKPQEEVFSEANSMPMESPVSSLALEDDEADSISQETAEADTIPEEEDLHANQAL
IPLESSGTPEVEDSFL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgtcagagtatgcactctccatctgacaaccattcttacagctcttttacac
ttctgtcctgagttctgttgcctggagatctcccctagcaacagtgaagtcgtcatggca
gcgggtgactccatgatcattacctgtaccggctgggggacggtcgaatggaggttcaag
cgggatgacaacgttccctattttggagtggagaaccagaacacgaccagtgttctcatt
ctggacaatgtgacatggagccaaacgggggtatatgtctgtgccgagacttggactgac
aagactatagaggtggcagtctttgtgccagaccctgatgtgtggttcattgagagtttc
cacggcatggtgactaagaccagcgaggaggggatcatcccgtgtgtggtcaccaacccc
cagatcaacgtcaccctctacgaaagagacagtgacatgcacctgaagggggtctacatc
ccaagtgagggctacagggcgcccctggaggacaggacctatgtgtgccgaggagagctg
aacggggaggagaaagagtcccaggctttctacgtcttcagcattgttgttccggagacg
atcgacgcctacatcaatgcgtctaagacggtgctgaagcagggcgagcctcttacagtg
aactgcacggtgcacggagtggagctggtcttcttctcctgggactatcccaatagagac
gtggactccattgagcctctgactgacgtcctgtcatcccagaagatgcgctcacgcctc
atagtctccaaggtgacgctggccaacacaggccagtatgcgtgtcatgtccacgagggt
gtcctggaccagagagccacagccaacgtcaacatcaccatccttgaacaaggcttcgtg
gagctgaggtccatccaggatcgtaatgtctcagcccagctgcaccagaacgtagagctg
agggtggagattgaagcttacccccctccacgtgtccgctggaccaaagatgatgccacg
gtcaacggggacaaagtcgtagtcaccacgcaggagcatgagaccaggtacgtcagcacg
ttgaccctggtgaggatcaggacagaacagaaaggcctctacaccgttcacgtcgccaac
ggagatgacaccaagaaattgacctttgatctagaggtcaaagtcccccctcagatcaca
gacctgtcagaccaccacctccctgggaagaggcatgcagtgacctgtgtggctgagggg
gtaccttcccccaccatccagtggttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctagtgtcagaccccgagaccctgagcgtccagaccaacgtc
agcttcaacgagagccgtaaggtgggccaggtccgcagccaggtcatcttccacaagccc
cagcaggtgagcgtccgctgcgaggctagcaacgagagaggactccgcaggagggacgtc
aaactggtgtccagcacttttttctcccaggtggcagtgttggctgcggttctagccctg
gtagtcatcgtcatcatctccatcatcatcctcatcgctgtgtggaggaagaagcctcgc
tatgagatcaggtggaaggtgatcgagtcagtgagtctggacggacatgagtacatctac
gttgaccccatccatctgccctatgaccttgcctgggagatgccccgagacagcctggtg
ctgggtcgtactcttgggtccggagcattcggcagggtggtcgaagcaaccgcgtatggt
ctcggtcattcccagtccagcacgaaagtggcagtgaaaatgctcaaatccacggccagg
aggagtgagacccaggctctaatgtcagagctgaagatcatgagccacctggggcctcac
ctcaacattgtcaacctgctgggggcctgcaccaaacagggccctctctacctggtgaca
gagtactgtcgctatggagacctggtggactacttacacaagaacaagcacacgttcctg
cagtactaccttgaaaagaaccaggaggactctggctgccgcatctctggagggagcact
cctctcagccagaggaaaggctacgtgtcatttggcagtgagtgtgacggtggttacatg
gacatgagtaaggacgagcccacagtgtacgtccccatgcaggagctgaaagacaccatc
aaatacgctgacatccaggcttctccctatgagtctccctatcagcacgaccattaccag
gaacaagaccagaccataatggaccctgccctgttcatcagtgactctaccaccctcagc
tatgctgacctcatcggcttcagctaccaggtggccaaaggcatggagttcctcgcctcc
aagaactgtgtccatcgtgacctggccgccaggaacgtgttgatctgtgaggggaaactg
gtgaagatctgtgactttggcctagccagagacatcatgcacgattccaactacatctcc
aaaggcagtacattcctgcccctgaagtggatggccccagagagtatcttccataacctg
tacaccaccctgagtgacgtgtggtcctacggcatcttgctctgggagatcttcaccctt
ggaggaaccccttaccctgaccttcccatgaatgagctgttttacagtgccttaaagaga
ggctatcgcatggccaaacctaaccatgccacagacgaagtttatgaagtgatgcagaaa
tgctgggatgagaagcatgagaagaggccagagttctcctttctggtgcacaccatgggg
aacatgctcactgacagctataaaaagagatactgccaagtcaacgacgagttcttcaag
agtgaccacccagccgtggtccgaaccaaacccaggctctcctctcccttccccacccca
gccatcaccccctccaccgcccctgacaccctccaggacctcaacccctaccccctaact
ggagactttagaccagagacagatggagaggaagtgacaacctcctacaacgactacatc
attcccatcccggaccccaagcctcaggaggaagtcttctccgaggccaacagcatgcca
atggaaagccccgtgagctctctggctctggaggatgatgaggctgactccatctcccag
gagacagcagaggcagacaccattccagaagaggaggatctccatgccaaccaggctctg
attccactggaatcttctggaacaccggaagtggaagacagcttcctgtag
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