Salmo trutta (river trout): 115175918
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Entry
115175918 CDS
T08542
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
stru
Salmo trutta (river trout)
Pathway
stru04144
Endocytosis
stru04145
Phagosome
stru04218
Cellular senescence
stru04514
Cell adhesion molecules
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115175918
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115175918
04145 Phagosome
115175918
09143 Cell growth and death
04218 Cellular senescence
115175918
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115175918
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115175918
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
115175918
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115175918
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
Antigens
115175918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
MHC_I_2
MHC_I_3
Ig_2
C2-set_3
RAMP
Phage_holin_3_6
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
115175918
NCBI-ProteinID:
XP_029591424
LinkDB
All DBs
Position
36:complement(32893948..32904219)
Genome browser
AA seq
363 aa
AA seq
DB search
MKGVILMFLGIVHLREAFSVTHSLKYFSTASSNIPNFPEFMVVGMVDGVQMVLYDSNSQK
VVPKQDWINKQTDAEFWESEREKFFDFQQSFKAEVDILKQRFNQSGGVHVLQYIYGCSRN
DETEQRDGFGKLGYNGEDFLVYDMNTLTWNALKQQANFMRDKWNNDNGRLVFWKTYFSQT
CIECLKKQVVNGKRPLMRTVPPSVSLLQKTPSSPVTCHATGFYPSGVMVVWKKDGQDHHE
DVKHGETLPNDDGTFQKSSHLKVTPEEWKNNKYQCVVQVTGIKEDFIKVLTESEIQTNWG
KTNWDDPAPNIVPIIGVVVALLLLVVAVVVGVVIWKKKSKKGFVPASTNDTDSAYSGKDL
LKT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtgttatcctcatgttcctgggaatagtgcaccttcgtgaagcatttagtgtg
actcactccctgaagtatttctccaccgcatcttcaaacattcccaacttcccagagttt
atggttgtggggatggtggatggtgttcagatggttctctatgacagcaacagccagaaa
gtggtgcccaaacaggactggattaacaagcagacagacgcagagttctgggagagcgag
agagagaaattctttgatttccagcagtctttcaaagctgaagtcgatattctaaagcag
cgttttaaccaaagtggaggagtccacgttctccagtacatatatggctgctcacggaat
gatgagactgaacagagagatggttttgggaagctcggttataatggggaggacttccta
gtgtacgacatgaatacattaacttggaacgctcttaaacagcaagctaatttcatgcgg
gataagtggaacaatgacaacggtagactggtattctggaagacctacttctcccagacc
tgcattgagtgcctgaagaagcaggtggtcaatgggaagaggcctctgatgaggacagtc
cctccatcagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctaca
ggtttctaccccagtggagtcatggtggtctggaagaaagatggacaagatcaccatgaa
gatgtgaagcatggagagactctccccaacgatgatggaaccttccagaaaagctcccac
ctcaaagtgacgcctgaggagtggaagaacaacaagtatcagtgtgttgttcaggtcact
ggtatcaaggaggactttatcaaggttctgactgagtctgagatccagaccaactgggga
aagaccaactgggatgacccagcccccaacattgtccccatcattggagtggttgtagct
ctcctcctcctggtcgttgctgttgttgttggggtcgtcatttggaagaagaagagtaag
aaaggctttgttccagccagcaccaacgacactgactctgcgtactctgggaaagatctc
ctgaagacttga
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integrated database retrieval system
