KEGG   Salmo trutta (river trout): 115176236
Entry
115176236         CDS       T08542                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04514  Cell adhesion molecules
stru04672  Intestinal immune network for IgA production
stru05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    115176236
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115176236
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115176236
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    115176236
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115176236
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115176236
  Exosomal proteins of epithelial cells
   115176236
  Exosomal proteins of breast milk
   115176236
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 115176236
NCBI-ProteinID: XP_029591958
Ensembl: ENSSTUG00000034211
LinkDB
Position
36:complement(498192..502800)
AA seq 245 aa
MSIPIAFYICLTLFLSIFYGIDGYFYHRVSECRYSSKDLQGIEYIDSFYFNQAEHVRFNS
TVGKYVGYTEYGVKSADAWNKDYLVQELGALESYCKYNAAIYYGAILDKTVAPHVRLSSV
TPPSGRHPAMLMCSAYDFYPKPIRVTWLRDGREVKSDVISTEELANGDWYYQIHSHLEYT
PRSGEKISCMVEHISLSEPMMYHCDPSLPEAERNKIAIGASGLVLGAILALAGLIYYKKK
SAGVL
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtcgattccaattgccttctacatttgcctgaccctgtttttgtccatattctatgga
atagatggatatttttatcacagggtgtcagagtgccgatactcctcaaaggacctgcag
ggtatagagtatatagactctttctacttcaatcaggctgaacatgtcagattcaacagc
actgtggggaagtatgttggatacactgagtatggtgtgaagagtgcagacgcatggaac
aaagattacctggttcaagagctaggggcgctggagagttactgcaagtataacgctgct
atctactacggcgccatactggacaagacagttgcgccccatgtcagactgagctcagtg
actccccctagtggcagacaccctgccatgctgatgtgcagcgcctatgacttctacccc
aaaccaatcagagtgacctggctgagggacggacgtgaggtgaaatctgatgtgatctcc
actgaggagctggctaacggggactggtactaccagatccactcccacttggagtacaca
cccaggtctggagagaagatctcctgtatggtggagcacatcagtctcagtgagcccatg
atgtatcactgcgacccgtccctgcctgaggctgagaggaataagatagcgatcggggcg
tctggtctggtgctgggagccatcttggcattagcaggactgatctactacaagaagaag
tctgctggggtgctctag

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